Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCN3P51790 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCN3P51790 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCN3P51790 MIR3936-201ENST00000584304 110 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCN3P51790 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCN3P51790 AC006116.5-201ENST00000591936 559 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCN3P51790 AC009704.2-201ENST00000618739 483 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC006840.1-201ENST00000623069 542 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 TMEM30CP-203ENST00000637814 1035 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC006927.4-201ENST00000639187 543 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCN3P51790 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CLCN3P51790 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCN3P51790 AC008079.2-201ENST00000623543 20396 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 MTCO1P18-201ENST00000455518 1419 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCN3P51790 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLCN3P51790 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCN3P51790 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCN3P51790 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCN3P51790 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 AC017007.4-201ENST00000503353 1352 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLCN3P51790 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLCN3P51790 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCN3P51790 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCN3P51790 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 RPS29P17-201ENST00000430795 166 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 MTND2P2-201ENST00000434633 945 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.97□□□□□ -1.61
CLCN3P51790 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCN3P51790 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.97□□□□□ -1.61
CLCN3P51790 AL606517.1-201ENST00000446914 387 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCN3P51790 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCN3P51790 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 RNU7-27P-201ENST00000459281 62 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 TRAV31-201ENST00000502780 342 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 IGBP1P5-201ENST00000507524 1000 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCN3P51790 IGKV2D-10-201ENST00000520194 281 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 AC104115.2-201ENST00000523026 687 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 AP003066.2-201ENST00000529375 555 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCN3P51790 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCN3P51790 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 ATP5J2P6-201ENST00000565203 266 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 AC136624.4-201ENST00000573044 370 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCN3P51790 AC069366.1-201ENST00000583159 838 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCN3P51790 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.97□□□□□ -1.61
CLCN3P51790 AC132825.7-201ENST00000638744 335 ntBASIC4.97□□□□□ -1.61
CLCN3P51790 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLCN3P51790 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLCN3P51790 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCN3P51790 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCN3P51790 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLCN3P51790 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCN3P51790 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCN3P51790 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCN3P51790 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.96□□□□□ -1.61
CLCN3P51790 LINC00622-201ENST00000562811 1570 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN3P51790 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN3P51790 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN3P51790 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN3P51790 AC008033.1-201ENST00000216407 1162 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLCN3P51790 RN7SKP74-201ENST00000362849 309 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCN3P51790 MIR142-201ENST00000384835 87 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 OR2AH1P-201ENST00000425717 928 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 AC011998.1-201ENST00000433403 117 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 AL353093.1-201ENST00000441292 436 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCN3P51790 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCN3P51790 AC022431.1-201ENST00000450941 438 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 RPS27AP17-201ENST00000463344 455 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 AC103987.1-201ENST00000473394 348 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCN3P51790 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCN3P51790 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN3P51790 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCN3P51790 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.96□□□□□ -1.62
CLCN3P51790 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCN3P51790 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms