Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CR1P49238 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CR1P49238 MIR4480-201ENST00000582492 71 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 AC011477.5-201ENST00000586571 259 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AC005034.4-201ENST00000603612 899 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AL049539.1-201ENST00000611964 459 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 AP005019.3-201ENST00000620418 560 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 AC103858.2-201ENST00000621471 543 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CX3CR1P49238 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CR1P49238 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.84□□□□□ -1.8
CX3CR1P49238 AL353743.4-201ENST00000422653 1547 ntBASIC3.84□□□□□ -1.8
CX3CR1P49238 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CX3CR1P49238 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.84□□□□□ -1.8
CX3CR1P49238 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CX3CR1P49238 AC018529.3-201ENST00000624212 2254 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CR1P49238 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CX3CR1P49238 RN7SKP103-201ENST00000363848 320 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 GCNT6-201ENST00000379591 934 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 SNORA70F-201ENST00000384142 135 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 GLULP6-201ENST00000399502 913 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.83□□□□□ -1.8
CX3CR1P49238 RPS23P10-201ENST00000416185 486 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AC007394.1-201ENST00000421941 531 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 RPL7AP25-201ENST00000423357 805 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 RPS12P5-201ENST00000423449 371 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 RPL30P3-201ENST00000424262 333 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AL160175.1-201ENST00000428124 247 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 USP9YP9-201ENST00000429406 715 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 PRELID3BP10-201ENST00000431957 584 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CR1P49238 ARL2BPP10-201ENST00000446487 531 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AC092691.2-201ENST00000461787 803 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 RN7SL812P-201ENST00000493791 279 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 RPS6P4-201ENST00000494693 758 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 SUMO1P1-201ENST00000497904 306 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AC093770.1-201ENST00000511559 571 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CR1P49238 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CR1P49238 AL049870.4-201ENST00000555741 486 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.83□□□□□ -1.8
CX3CR1P49238 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CR1P49238 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CR1P49238 ABI1P1-201ENST00000603375 1120 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.83□□□□□ -1.8
CX3CR1P49238 AL031666.3-201ENST00000609320 1006 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AL161616.1-201ENST00000611867 286 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 MIR7973-1-201ENST00000614683 76 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 MIR6891-201ENST00000618788 93 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CX3CR1P49238 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CR1P49238 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CR1P49238 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.83□□□□□ -1.8
CX3CR1P49238 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CR1P49238 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CR1P49238 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CR1P49238 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CR1P49238 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.83□□□□□ -1.8
CX3CR1P49238 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CR1P49238 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CR1P49238 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CX3CR1P49238 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CR1P49238 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CX3CR1P49238 SNORA62.2-201ENST00000364672 152 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CR1P49238 RWDD4P2-201ENST00000426392 563 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 ELOCP18-201ENST00000434209 337 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 CEACAMP1-201ENST00000434624 1035 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC006466.1-201ENST00000438721 289 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC114495.1-201ENST00000441274 436 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 RPL35AP28-201ENST00000459730 331 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 RN7SL610P-201ENST00000463845 291 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.82□□□□□ -1.8
CX3CR1P49238 RWDD4P1-201ENST00000488019 565 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 ATP1B1P1-201ENST00000509767 915 ntBASIC3.82□□□□□ -1.8
CX3CR1P49238 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.82□□□□□ -1.8
CX3CR1P49238 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CR1P49238 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CR1P49238 PHBP17-201ENST00000528576 541 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms