Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CXCL12P48061 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL12P48061 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.13□□□□□ -1.75
CXCL12P48061 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.13□□□□□ -1.75
CXCL12P48061 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL12P48061 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL12P48061 AL645927.2-201ENST00000618350 349 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CXCL12P48061 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL12P48061 AL034408.1-202ENST00000636088 415 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
CXCL12P48061 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL12P48061 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL12P48061 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL12P48061 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL12P48061 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL12P48061 AC024560.2-201ENST00000507981 1497 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL12P48061 ZNF285B-201ENST00000561698 1767 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL12P48061 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL12P48061 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL12P48061 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
CXCL12P48061 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL12P48061 AC083843.3-201ENST00000623679 2186 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL12P48061 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CXCL12P48061 MIR34B-201ENST00000385076 84 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL12P48061 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.12□□□□□ -1.75
CXCL12P48061 AL161631.1-201ENST00000417933 486 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL12P48061 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.12□□□□□ -1.75
CXCL12P48061 AC091286.1-201ENST00000431233 461 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL12P48061 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.12□□□□□ -1.75
CXCL12P48061 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.12□□□□□ -1.75
CXCL12P48061 AC108022.1-201ENST00000493466 478 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 RN7SL323P-201ENST00000494712 295 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 RNU1-95P-201ENST00000516357 160 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 SCARNA13-201ENST00000516672 275 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 RNU1-128P-201ENST00000516704 160 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL12P48061 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL12P48061 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CXCL12P48061 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL12P48061 AC234775.3-201ENST00000564612 656 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 AC115989.2-201ENST00000578640 563 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 AC005034.4-201ENST00000603612 899 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 AL160281.1-201ENST00000605307 311 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 AC005972.3-201ENST00000606304 481 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.12□□□□□ -1.75
CXCL12P48061 AC234782.5-201ENST00000617723 324 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 HSPD1P14-201ENST00000432666 1618 ntBASIC4.12□□□□□ -1.75
CXCL12P48061 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL12P48061 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL12P48061 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL12P48061 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
CXCL12P48061 MAPK10-304ENST00000641341 3984 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.11□□□□□ -1.75
CXCL12P48061 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 AC073136.1-201ENST00000449426 2884 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
CXCL12P48061 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 RBMY1KP-201ENST00000423480 476 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL12P48061 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL12P48061 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL12P48061 RPS20P21-201ENST00000466859 343 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 RPL5P16-201ENST00000471467 790 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL12P48061 AC110768.1-201ENST00000509222 400 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 RNA5SP360-201ENST00000516555 118 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL12P48061 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL12P48061 MIR3936-201ENST00000584304 110 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 AC110743.1-201ENST00000584870 478 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 MIR6868-201ENST00000611215 58 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 AC096577.2-201ENST00000611455 153 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 AL357559.1-201ENST00000622228 274 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.11□□□□□ -1.75
CXCL12P48061 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CXCL12P48061 LINC00561-201ENST00000565815 2738 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.11□□□□□ -1.75
CXCL12P48061 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CXCL12P48061 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CXCL12P48061 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL12P48061 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL12P48061 AP001002.1-201ENST00000625148 1513 ntBASIC4.11□□□□□ -1.75
CXCL12P48061 THAP12P8-201ENST00000447914 2115 ntBASIC4.1□□□□□ -1.75
CXCL12P48061 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 266.2 ms