Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SNORA11C-201ENST00000408532 129 ntBASIC4.89□□□□□ -1.63
HADHAP40939 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.89□□□□□ -1.63
HADHAP40939 VN1R37P-201ENST00000419096 748 ntBASIC4.89□□□□□ -1.63
HADHAP40939 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.89□□□□□ -1.63
HADHAP40939 PTP4A1P7-201ENST00000423476 514 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HADHAP40939 FO393414.1-201ENST00000428697 1184 ntBASIC4.89□□□□□ -1.63
HADHAP40939 YWHAEP5-201ENST00000431545 765 ntBASIC4.89□□□□□ -1.63
HADHAP40939 RPL7P11-201ENST00000437586 658 ntBASIC4.89□□□□□ -1.63
HADHAP40939 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.89□□□□□ -1.63
HADHAP40939 SLC25A18P1-201ENST00000449385 454 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.89□□□□□ -1.63
HADHAP40939 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HADHAP40939 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.89□□□□□ -1.63
HADHAP40939 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.89□□□□□ -1.63
HADHAP40939 AC104115.2-201ENST00000523026 687 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.89□□□□□ -1.63
HADHAP40939 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.89□□□□□ -1.63
HADHAP40939 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.89□□□□□ -1.63
HADHAP40939 MIR4789-201ENST00000577469 82 ntBASIC4.89□□□□□ -1.63
HADHAP40939 NF1P5-201ENST00000588287 448 ntBASIC4.89□□□□□ -1.63
HADHAP40939 PCNAP1-202ENST00000595299 752 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AC010424.2-201ENST00000607594 443 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AC097504.2-201ENST00000608088 454 ntBASIC4.89□□□□□ -1.63
HADHAP40939 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HADHAP40939 Mico1.1-201ENST00000611698 204 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AP001784.1-201ENST00000624107 428 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AP003072.4-201ENST00000624580 310 ntBASIC4.89□□□□□ -1.63
HADHAP40939 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.89□□□□□ -1.63
HADHAP40939 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.89□□□□□ -1.63
HADHAP40939 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
HADHAP40939 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HADHAP40939 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.89□□□□□ -1.63
HADHAP40939 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.89□□□□□ -1.63
HADHAP40939 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HADHAP40939 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
HADHAP40939 AC120338.1-201ENST00000625074 1541 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC074029.4-201ENST00000624796 1859 ntBASIC4.88□□□□□ -1.63
HADHAP40939 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.88□□□□□ -1.63
HADHAP40939 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HADHAP40939 AC103591.2-201ENST00000265259 766 ntBASIC4.88□□□□□ -1.63
HADHAP40939 RNU5B-4P-201ENST00000363508 111 ntBASIC4.88□□□□□ -1.63
HADHAP40939 RN7SKP103-201ENST00000363848 320 ntBASIC4.88□□□□□ -1.63
HADHAP40939 U6.112-201ENST00000384129 70 ntBASIC4.88□□□□□ -1.63
HADHAP40939 MIR585-201ENST00000384887 94 ntBASIC4.88□□□□□ -1.63
HADHAP40939 RNA5SP345-201ENST00000410646 108 ntBASIC4.88□□□□□ -1.63
HADHAP40939 RPL37P18-201ENST00000411602 243 ntBASIC4.88□□□□□ -1.63
HADHAP40939 GTF2IP5-201ENST00000414608 731 ntBASIC4.88□□□□□ -1.63
HADHAP40939 CHEK2P3-201ENST00000416118 248 ntBASIC4.88□□□□□ -1.63
HADHAP40939 TBCAP2-201ENST00000416175 326 ntBASIC4.88□□□□□ -1.63
HADHAP40939 RGS17P1-201ENST00000423358 553 ntBASIC4.88□□□□□ -1.63
HADHAP40939 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.88□□□□□ -1.63
HADHAP40939 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AL451139.1-201ENST00000434718 346 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.88□□□□□ -1.63
HADHAP40939 AC004938.1-201ENST00000438468 308 ntBASIC4.88□□□□□ -1.63
HADHAP40939 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.88□□□□□ -1.63
HADHAP40939 AC092809.1-201ENST00000441469 474 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.88□□□□□ -1.63
HADHAP40939 GXYLT1P1-201ENST00000446657 490 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AL050341.1-201ENST00000447743 313 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC000111.2-201ENST00000448200 210 ntBASIC4.88□□□□□ -1.63
HADHAP40939 OR51B8P-201ENST00000449892 769 ntBASIC4.88□□□□□ -1.63
HADHAP40939 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.88□□□□□ -1.63
HADHAP40939 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.88□□□□□ -1.63
HADHAP40939 ATP5G1P3-201ENST00000463301 410 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC010374.1-201ENST00000503762 1237 ntBASIC4.88□□□□□ -1.63
HADHAP40939 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.88□□□□□ -1.63
HADHAP40939 AC098799.3-201ENST00000506095 438 ntBASIC4.88□□□□□ -1.63
HADHAP40939 RN7SKP283-201ENST00000517197 270 ntBASIC4.88□□□□□ -1.63
HADHAP40939 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.88□□□□□ -1.63
HADHAP40939 AC006518.1-201ENST00000541449 943 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.88□□□□□ -1.63
HADHAP40939 MIR3934-201ENST00000579806 107 ntBASIC4.88□□□□□ -1.63
HADHAP40939 MIR4436B2-201ENST00000581415 91 ntBASIC4.88□□□□□ -1.63
HADHAP40939 MIR4436B1-201ENST00000583272 91 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.88□□□□□ -1.63
HADHAP40939 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.88□□□□□ -1.63
HADHAP40939 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.88□□□□□ -1.63
HADHAP40939 AC104785.1-201ENST00000603220 588 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.88□□□□□ -1.63
HADHAP40939 AL139022.2-201ENST00000606934 443 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AL136295.6-201ENST00000610486 658 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC022306.3-201ENST00000619930 550 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC073342.3-201ENST00000624211 193 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HADHAP40939 MAPK10-263ENST00000641052 4307 ntBASIC4.88□□□□□ -1.63
HADHAP40939 AC104446.1-201ENST00000613728 1321 ntBASIC4.88□□□□□ -1.63
HADHAP40939 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HADHAP40939 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.88□□□□□ -1.63
HADHAP40939 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
HADHAP40939 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HADHAP40939 INTS6P1-201ENST00000504674 2530 ntBASIC4.88□□□□□ -1.63
HADHAP40939 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HADHAP40939 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HADHAP40939 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.87□□□□□ -1.63
HADHAP40939 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HADHAP40939 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms