Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP6P35125 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.38□□□□□ -1.55
USP6P35125 CASC19-284ENST00000642142 1868 ntBASIC5.38□□□□□ -1.55
USP6P35125 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP6P35125 AC233289.1-201ENST00000403700 508 ntBASIC5.38□□□□□ -1.55
USP6P35125 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.38□□□□□ -1.55
USP6P35125 AL355994.1-201ENST00000424379 260 ntBASIC5.38□□□□□ -1.55
USP6P35125 UBE2CP3-201ENST00000502715 450 ntBASIC5.38□□□□□ -1.55
USP6P35125 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.38□□□□□ -1.55
USP6P35125 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.38□□□□□ -1.55
USP6P35125 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.38□□□□□ -1.55
USP6P35125 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.38□□□□□ -1.55
USP6P35125 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.38□□□□□ -1.55
USP6P35125 AC015922.4-201ENST00000612568 690 ntBASIC5.38□□□□□ -1.55
USP6P35125 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.38□□□□□ -1.55
USP6P35125 NCOA4P2-201ENST00000340589 1813 ntBASIC5.38□□□□□ -1.55
USP6P35125 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.37□□□□□ -1.55
USP6P35125 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.37□□□□□ -1.55
USP6P35125 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.37□□□□□ -1.55
USP6P35125 AL121878.1-201ENST00000418638 859 ntBASIC5.37□□□□□ -1.55
USP6P35125 AL139247.1-201ENST00000422768 325 ntBASIC5.37□□□□□ -1.55
USP6P35125 Z74696.2-201ENST00000436514 498 ntBASIC5.37□□□□□ -1.55
USP6P35125 VN1R96P-201ENST00000446052 858 ntBASIC5.37□□□□□ -1.55
USP6P35125 AL133162.1-201ENST00000463228 453 ntBASIC5.37□□□□□ -1.55
USP6P35125 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.37□□□□□ -1.55
USP6P35125 IGKV2D-19-201ENST00000523346 262 ntBASIC5.37□□□□□ -1.55
USP6P35125 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.37□□□□□ -1.55
USP6P35125 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.37□□□□□ -1.55
USP6P35125 AC015967.1-201ENST00000619893 476 ntBASIC5.37□□□□□ -1.55
USP6P35125 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
USP6P35125 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 AP004289.2-201ENST00000444413 1457 ntBASIC5.37□□□□□ -1.55
USP6P35125 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
USP6P35125 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.37□□□□□ -1.55
USP6P35125 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP6P35125 AL929601.4-201ENST00000613011 1341 ntBASIC5.36□□□□□ -1.55
USP6P35125 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.36□□□□□ -1.55
USP6P35125 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.36□□□□□ -1.55
USP6P35125 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP6P35125 MARK2P15-201ENST00000432204 2186 ntBASIC5.36□□□□□ -1.55
USP6P35125 PSMC1P13-201ENST00000458195 985 ntBASIC5.36□□□□□ -1.55
USP6P35125 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.36□□□□□ -1.55
USP6P35125 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.36□□□□□ -1.55
USP6P35125 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.36□□□□□ -1.55
USP6P35125 AC093014.1-201ENST00000548926 724 ntBASIC5.36□□□□□ -1.55
USP6P35125 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.36□□□□□ -1.55
USP6P35125 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP6P35125 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP6P35125 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP6P35125 AP001642.1-201ENST00000624727 2117 ntBASIC5.36□□□□□ -1.55
USP6P35125 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP6P35125 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.36□□□□□ -1.55
USP6P35125 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.36□□□□□ -1.55
USP6P35125 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
USP6P35125 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.35□□□□□ -1.55
USP6P35125 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP6P35125 AP002001.2-201ENST00000529025 1469 ntBASIC5.35□□□□□ -1.55
USP6P35125 RNA5SP97-201ENST00000365006 84 ntBASIC5.35□□□□□ -1.55
USP6P35125 MIR199A2-201ENST00000385289 110 ntBASIC5.35□□□□□ -1.55
USP6P35125 PTMAP5-201ENST00000393073 333 ntBASIC5.35□□□□□ -1.55
USP6P35125 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
USP6P35125 TRIM60P17-201ENST00000415181 719 ntBASIC5.35□□□□□ -1.55
USP6P35125 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.35□□□□□ -1.55
USP6P35125 AL591419.1-201ENST00000427423 339 ntBASIC5.35□□□□□ -1.55
USP6P35125 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.35□□□□□ -1.55
USP6P35125 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.35□□□□□ -1.55
USP6P35125 ARL4AP3-201ENST00000441452 574 ntBASIC5.35□□□□□ -1.55
USP6P35125 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.35□□□□□ -1.55
USP6P35125 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.35□□□□□ -1.55
USP6P35125 RNA5SP103-201ENST00000459503 118 ntBASIC5.35□□□□□ -1.55
USP6P35125 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.35□□□□□ -1.55
USP6P35125 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP6P35125 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP6P35125 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.35□□□□□ -1.55
USP6P35125 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.35□□□□□ -1.55
USP6P35125 NPM1P47-201ENST00000560843 856 ntBASIC5.35□□□□□ -1.55
USP6P35125 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.35□□□□□ -1.55
USP6P35125 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.35□□□□□ -1.55
USP6P35125 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.35□□□□□ -1.55
USP6P35125 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.35□□□□□ -1.55
USP6P35125 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.35□□□□□ -1.55
USP6P35125 AC005972.3-201ENST00000606304 481 ntBASIC5.35□□□□□ -1.55
USP6P35125 AL354950.1-201ENST00000614150 568 ntBASIC5.35□□□□□ -1.55
USP6P35125 AL034408.1-202ENST00000636088 415 ntBASIC5.35□□□□□ -1.55
USP6P35125 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
USP6P35125 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP6P35125 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP6P35125 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.34□□□□□ -1.55
USP6P35125 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP6P35125 Z95331.1-201ENST00000623075 23112 ntBASIC5.34□□□□□ -1.55
USP6P35125 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.34□□□□□ -1.55
USP6P35125 CYCSP10-201ENST00000417973 294 ntBASIC5.34□□□□□ -1.55
USP6P35125 AC092647.1-201ENST00000420654 287 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms