Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA11P31270 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA11P31270 RPL12P46-201ENST00000436610 195 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA11P31270 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA11P31270 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA11P31270 MTND2P28-201ENST00000457540 1044 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 RPL7AP52-201ENST00000458096 790 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 UBA52P3-201ENST00000491303 382 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 RNA5SP249-201ENST00000516127 99 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.04□□□□□ -1.6
HOXA11P31270 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA11P31270 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA11P31270 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA11P31270 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA11P31270 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA11P31270 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA11P31270 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA11P31270 MIR4277-201ENST00000578298 84 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA11P31270 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA11P31270 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA11P31270 AC005191.1-201ENST00000603950 358 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 AL450336.1-201ENST00000605180 586 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 AP002802.2-201ENST00000605877 235 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 AL121873.1-201ENST00000616013 524 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 AL355493.4-201ENST00000618530 292 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA11P31270 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA11P31270 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA11P31270 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA11P31270 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA11P31270 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HOXA11P31270 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HOXA11P31270 AL445487.1-201ENST00000415694 1580 ntBASIC5.04□□□□□ -1.6
HOXA11P31270 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA11P31270 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA11P31270 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
HOXA11P31270 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC120338.1-201ENST00000625074 1541 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA11P31270 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA11P31270 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXA11P31270 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA11P31270 Z98745.1-201ENST00000402553 494 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 MTCO2P31-201ENST00000402702 684 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AL355615.1-201ENST00000406187 641 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 RNU6-603P-201ENST00000411403 107 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC096533.1-201ENST00000411645 353 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA11P31270 UBE2V1P9-201ENST00000414760 368 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC005005.2-201ENST00000420779 380 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 COX6CP17-201ENST00000421389 185 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 CHIAP3-201ENST00000423668 1133 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC115285.1-201ENST00000424879 736 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 HSPE1P16-201ENST00000426640 348 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA11P31270 EXOSC3P1-201ENST00000448649 500 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA11P31270 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA11P31270 AC026979.1-201ENST00000492525 396 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC008427.1-201ENST00000503102 655 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC067904.2-201ENST00000517322 1283 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA11P31270 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.03□□□□□ -1.6
HOXA11P31270 AP000827.1-201ENST00000527814 258 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA11P31270 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA11P31270 SETP1-201ENST00000556014 845 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA11P31270 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA11P31270 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.03□□□□□ -1.6
HOXA11P31270 AC026741.1-201ENST00000605892 482 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC005021.1-201ENST00000608730 355 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA11P31270 AL359757.1-201ENST00000623176 255 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AP002791.1-201ENST00000623291 381 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AP003497.2-201ENST00000624220 967 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 FRG1DP-201ENST00000635586 771 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 AC119674.1-212ENST00000641155 993 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA11P31270 CASC19-206ENST00000641028 1430 ntBASIC5.03□□□□□ -1.6
HOXA11P31270 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXA11P31270 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA11P31270 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA11P31270 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXA11P31270 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA11P31270 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HOXA11P31270 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA11P31270 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HOXA11P31270 ZNF29P-201ENST00000225587 168 ntBASIC5.02□□□□□ -1.61
HOXA11P31270 RPL32P3-201ENST00000359025 275 ntBASIC5.02□□□□□ -1.61
HOXA11P31270 SNORA71.2-201ENST00000364941 134 ntBASIC5.02□□□□□ -1.61
HOXA11P31270 AC019155.1-201ENST00000382242 574 ntBASIC5.02□□□□□ -1.61
HOXA11P31270 RNU6-468P-201ENST00000384003 109 ntBASIC5.02□□□□□ -1.61
HOXA11P31270 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXA11P31270 AL049545.1-201ENST00000401856 572 ntBASIC5.02□□□□□ -1.61
HOXA11P31270 FABP12P1-201ENST00000401911 322 ntBASIC5.02□□□□□ -1.61
HOXA11P31270 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA11P31270 EIF4A1P3-201ENST00000411521 244 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms