Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
COL4A5P29400 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC4.65□□□□□ -1.66
COL4A5P29400 AL158156.1-201ENST00000422509 473 ntBASIC4.65□□□□□ -1.66
COL4A5P29400 RPL5P12-201ENST00000477071 851 ntBASIC4.65□□□□□ -1.66
COL4A5P29400 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.65□□□□□ -1.66
COL4A5P29400 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.65□□□□□ -1.66
COL4A5P29400 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.65□□□□□ -1.66
COL4A5P29400 AC006960.3-201ENST00000561845 705 ntBASIC4.65□□□□□ -1.66
COL4A5P29400 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
COL4A5P29400 MIR7702-201ENST00000621931 59 ntBASIC4.65□□□□□ -1.66
COL4A5P29400 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL4A5P29400 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.65□□□□□ -1.67
COL4A5P29400 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
COL4A5P29400 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL4A5P29400 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
COL4A5P29400 AC093591.2-201ENST00000565254 3843 ntBASIC4.65□□□□□ -1.67
COL4A5P29400 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL4A5P29400 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A5P29400 MIR128-1-201ENST00000384921 82 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 NPM1P36-201ENST00000415681 835 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 RPS23P10-201ENST00000416185 486 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 AC005300.1-201ENST00000428401 373 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 CYCSP4-201ENST00000429682 331 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 AL591473.1-201ENST00000464297 313 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 RPL23AP65-201ENST00000475608 468 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A5P29400 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.64□□□□□ -1.67
COL4A5P29400 AC016550.3-201ENST00000515706 767 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 DEFB109D-201ENST00000529497 240 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A5P29400 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.64□□□□□ -1.67
COL4A5P29400 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.64□□□□□ -1.67
COL4A5P29400 AC124312.6-202ENST00000623624 418 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A5P29400 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
COL4A5P29400 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A5P29400 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A5P29400 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A5P29400 AC112198.2-201ENST00000426589 6996 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A5P29400 CBX1P3-201ENST00000413296 527 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 AL121878.1-201ENST00000418638 859 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 AC073387.1-201ENST00000453261 709 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 DEFB109A-201ENST00000482450 265 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A5P29400 HMGN1P11-201ENST00000508668 303 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.64□□□□□ -1.67
COL4A5P29400 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A5P29400 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A5P29400 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 AC008759.1-201ENST00000589783 983 ntBASIC4.64□□□□□ -1.67
COL4A5P29400 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A5P29400 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL4A5P29400 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
COL4A5P29400 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A5P29400 AC007823.1-201ENST00000569932 1566 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A5P29400 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A5P29400 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A5P29400 SNORA48.2-201ENST00000390926 124 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A5P29400 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A5P29400 AC097713.2-201ENST00000430199 356 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 AL031584.1-201ENST00000447169 754 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 RPS29P2-201ENST00000479278 136 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A5P29400 DEFB109F-201ENST00000491870 277 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.63□□□□□ -1.67
COL4A5P29400 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A5P29400 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.63□□□□□ -1.67
COL4A5P29400 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
COL4A5P29400 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.63□□□□□ -1.67
COL4A5P29400 AC020914.6-201ENST00000594327 272 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 MIR8058-201ENST00000615737 89 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 AC015722.2-201ENST00000622210 551 ntBASIC4.63□□□□□ -1.67
COL4A5P29400 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.63□□□□□ -1.67
COL4A5P29400 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A5P29400 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A5P29400 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A5P29400 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A5P29400 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A5P29400 RNU1-33P-201ENST00000364249 162 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A5P29400 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.62□□□□□ -1.67
COL4A5P29400 RPS7P15-201ENST00000415804 584 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 DPY19L1P2-201ENST00000426647 915 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 RN7SL601P-201ENST00000471221 293 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 AL049873.1-201ENST00000480540 376 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 AP000563.1-201ENST00000490865 758 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.62□□□□□ -1.67
COL4A5P29400 AC138938.1-201ENST00000515431 782 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 SNORA70.18-201ENST00000516696 98 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 AC016839.1-201ENST00000578162 867 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.62□□□□□ -1.67
COL4A5P29400 AL137843.1-201ENST00000605078 385 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 AC015922.4-201ENST00000612568 690 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 AC095038.2-201ENST00000621464 1070 ntBASIC4.62□□□□□ -1.67
COL4A5P29400 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A5P29400 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms