Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL513478.4-201ENST00000641636 310 ntBASIC3.65□□□□□ -1.83
ATF1P18846 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATF1P18846 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATF1P18846 PHKBP1-201ENST00000450951 1951 ntBASIC3.65□□□□□ -1.83
ATF1P18846 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATF1P18846 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATF1P18846 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.64□□□□□ -1.83
ATF1P18846 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ATF1P18846 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATF1P18846 AC079741.1-201ENST00000321498 212 ntBASIC3.64□□□□□ -1.83
ATF1P18846 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ATF1P18846 MIR323B-201ENST00000385269 82 ntBASIC3.64□□□□□ -1.83
ATF1P18846 RNA5SP332-201ENST00000391063 115 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AC240504.1-201ENST00000395709 845 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AL583835.1-201ENST00000399570 407 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.64□□□□□ -1.83
ATF1P18846 AC007064.3-201ENST00000422608 359 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AL157831.1-201ENST00000426134 473 ntBASIC3.64□□□□□ -1.83
ATF1P18846 MTCO3P21-201ENST00000430791 643 ntBASIC3.64□□□□□ -1.83
ATF1P18846 RPL12P28-201ENST00000430852 489 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AC087650.1-201ENST00000431445 468 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 AC092013.1-201ENST00000438795 332 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 MTCO3P17-201ENST00000443775 513 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 RNU6-1218P-201ENST00000458990 108 ntBASIC3.64□□□□□ -1.83
ATF1P18846 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.64□□□□□ -1.83
ATF1P18846 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 HPRT1P2-201ENST00000505250 544 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.64□□□□□ -1.83
ATF1P18846 RNU6-319P-201ENST00000516025 108 ntBASIC3.64□□□□□ -1.83
ATF1P18846 RNA5SP73-201ENST00000516744 108 ntBASIC3.64□□□□□ -1.83
ATF1P18846 IGLVIV-65-201ENST00000517313 360 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 DEFB109D-201ENST00000529497 240 ntBASIC3.64□□□□□ -1.83
ATF1P18846 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 NPM1P45-201ENST00000583151 559 ntBASIC3.64□□□□□ -1.83
ATF1P18846 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.64□□□□□ -1.83
ATF1P18846 AP003392.5-201ENST00000607857 415 ntBASIC3.64□□□□□ -1.83
ATF1P18846 MIR486-1-201ENST00000612171 68 ntBASIC3.64□□□□□ -1.83
ATF1P18846 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF1P18846 RN7SL722P-201ENST00000617780 284 ntBASIC3.64□□□□□ -1.83
ATF1P18846 RN7SL565P-201ENST00000618246 284 ntBASIC3.64□□□□□ -1.83
ATF1P18846 AC145207.9-201ENST00000623802 325 ntBASIC3.64□□□□□ -1.83
ATF1P18846 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
ATF1P18846 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.64□□□□□ -1.83
ATF1P18846 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
ATF1P18846 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.63□□□□□ -1.83
ATF1P18846 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF1P18846 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.63□□□□□ -1.83
ATF1P18846 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ATF1P18846 RNU6-304P-201ENST00000364855 107 ntBASIC3.63□□□□□ -1.83
ATF1P18846 MIR129-1-201ENST00000384972 72 ntBASIC3.63□□□□□ -1.83
ATF1P18846 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 RN7SKP56-201ENST00000410513 331 ntBASIC3.63□□□□□ -1.83
ATF1P18846 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 OR6K4P-201ENST00000423179 955 ntBASIC3.63□□□□□ -1.83
ATF1P18846 AL138785.1-201ENST00000425821 331 ntBASIC3.63□□□□□ -1.83
ATF1P18846 USP12PY-201ENST00000427677 1064 ntBASIC3.63□□□□□ -1.83
ATF1P18846 RPL23AP52-201ENST00000439311 478 ntBASIC3.63□□□□□ -1.83
ATF1P18846 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 RPS29P19-201ENST00000479709 171 ntBASIC3.63□□□□□ -1.83
ATF1P18846 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 AC005912.1-201ENST00000495392 255 ntBASIC3.63□□□□□ -1.83
ATF1P18846 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 RNA5SP143-201ENST00000516936 115 ntBASIC3.63□□□□□ -1.83
ATF1P18846 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.63□□□□□ -1.83
ATF1P18846 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.63□□□□□ -1.83
ATF1P18846 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.63□□□□□ -1.83
ATF1P18846 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.63□□□□□ -1.83
ATF1P18846 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.63□□□□□ -1.83
ATF1P18846 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.63□□□□□ -1.83
ATF1P18846 AC110743.1-201ENST00000584870 478 ntBASIC3.63□□□□□ -1.83
ATF1P18846 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF1P18846 FAM60CP-201ENST00000591086 664 ntBASIC3.63□□□□□ -1.83
ATF1P18846 RPL12P25-202ENST00000598100 674 ntBASIC3.63□□□□□ -1.83
ATF1P18846 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.63□□□□□ -1.83
ATF1P18846 PSMA6P4-201ENST00000603247 718 ntBASIC3.63□□□□□ -1.83
ATF1P18846 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF1P18846 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 AP001784.1-201ENST00000624107 428 ntBASIC3.63□□□□□ -1.83
ATF1P18846 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms