Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC007494.1-201ENST00000562293 760 ntBASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 MRPS21P7-201ENST00000566937 238 ntBASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 AC005498.1-201ENST00000592125 465 ntBASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 AC063977.5-201ENST00000601044 974 ntBASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 AL137141.1-201ENST00000624622 4836 ntBASIC7.71□□□□□ -1.18
CSB-PGBD3P0DP91 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 RNA5SP507-201ENST00000363603 121 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 RNA5SP131-201ENST00000365452 119 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 RN7SKP216-201ENST00000411050 312 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 RPL7P4-203ENST00000430239 730 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 TXNP5-201ENST00000441043 315 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 DNAJC19P1-201ENST00000455312 319 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 RPS4XP12-201ENST00000461747 709 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 RN7SL329P-201ENST00000467740 299 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 RN7SL808P-201ENST00000496066 299 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AC048346.1-201ENST00000510247 144 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AP000860.1-201ENST00000605250 559 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AP004247.3-201ENST00000608682 624 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AC093838.1-201ENST00000613014 469 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AC024614.3-201ENST00000637860 256 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AC099063.3-201ENST00000642066 185 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AC092725.2-201ENST00000567658 1389 ntBASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CSB-PGBD3P0DP91 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 THAP12P9-201ENST00000503971 2360 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 MT-TL1-201ENST00000386347 75 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 RNU6-876P-201ENST00000391295 104 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 CIR1P3-201ENST00000405137 479 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AL450992.3-201ENST00000413192 568 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 HMGA1P8-201ENST00000414130 321 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 C1DP2-201ENST00000418167 426 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AF228730.4-201ENST00000421457 183 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC007559.1-201ENST00000428736 355 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 CYCSP12-201ENST00000437729 300 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC007677.1-201ENST00000445757 515 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 RPL23AP35-201ENST00000451906 501 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AL672167.3-201ENST00000465951 960 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 NIPA2P2-201ENST00000496376 1083 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC006499.5-201ENST00000505037 514 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC012360.2-201ENST00000609349 391 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC018926.3-201ENST00000618841 406 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms