Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.12□□□□□ -1.75
SFTPBP07988 AC091953.3-201ENST00000623220 236 ntBASIC4.12□□□□□ -1.75
SFTPBP07988 AP006248.2-201ENST00000623309 592 ntBASIC4.12□□□□□ -1.75
SFTPBP07988 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.12□□□□□ -1.75
SFTPBP07988 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 AL049555.1-201ENST00000562834 1933 ntBASIC4.12□□□□□ -1.75
SFTPBP07988 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SFTPBP07988 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.12□□□□□ -1.75
SFTPBP07988 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.12□□□□□ -1.75
SFTPBP07988 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.12□□□□□ -1.75
SFTPBP07988 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.12□□□□□ -1.75
SFTPBP07988 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SFTPBP07988 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.12□□□□□ -1.75
SFTPBP07988 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.11□□□□□ -1.75
SFTPBP07988 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 SEC63P2-201ENST00000503863 1939 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
SFTPBP07988 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
SFTPBP07988 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 IL6STP1-201ENST00000346911 1020 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SFTPBP07988 SNORD96B-201ENST00000386148 79 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 Z97832.1-201ENST00000402490 328 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.11□□□□□ -1.75
SFTPBP07988 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 FABP7P1-201ENST00000424004 391 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 UBE2V1P6-201ENST00000430840 422 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AC004938.1-201ENST00000438468 308 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 HMGB3P9-201ENST00000441799 583 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AC112498.1-201ENST00000444401 332 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 DNAJC19P8-201ENST00000452887 259 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 RPL7P16-201ENST00000479738 738 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 DEFB109F-201ENST00000491870 277 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 RN7SL558P-201ENST00000497468 299 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.11□□□□□ -1.75
SFTPBP07988 AC008494.2-201ENST00000514544 370 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 MTND1P36-201ENST00000522384 936 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AC021006.3-201ENST00000530771 192 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 ATP5F1P7-201ENST00000567330 760 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 AL031320.1-201ENST00000604177 357 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 IMMP1LP1-201ENST00000605170 488 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.11□□□□□ -1.75
SFTPBP07988 AL669942.2-201ENST00000620352 697 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 AC015804.1-201ENST00000622935 435 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SFTPBP07988 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.11□□□□□ -1.75
SFTPBP07988 AC119744.1-201ENST00000454746 1715 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 AL049737.1-201ENST00000413920 1403 ntBASIC4.11□□□□□ -1.75
SFTPBP07988 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SFTPBP07988 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SFTPBP07988 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.1□□□□□ -1.75
SFTPBP07988 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.1□□□□□ -1.75
SFTPBP07988 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SFTPBP07988 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SFTPBP07988 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SFTPBP07988 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.1□□□□□ -1.75
SFTPBP07988 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SFTPBP07988 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SFTPBP07988 RNA5SP391-201ENST00000363456 119 ntBASIC4.1□□□□□ -1.75
SFTPBP07988 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SFTPBP07988 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SFTPBP07988 AC004022.2-201ENST00000413824 193 ntBASIC4.1□□□□□ -1.75
SFTPBP07988 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.1□□□□□ -1.75
SFTPBP07988 AL360081.1-201ENST00000428299 555 ntBASIC4.1□□□□□ -1.75
SFTPBP07988 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.1□□□□□ -1.75
SFTPBP07988 AC092809.1-201ENST00000441469 474 ntBASIC4.1□□□□□ -1.75
SFTPBP07988 RPS26P30-201ENST00000443431 335 ntBASIC4.1□□□□□ -1.75
SFTPBP07988 RPL6P5-201ENST00000445678 828 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 439.8 ms