Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 HMGB1P23-201ENST00000518743 568 ntBASIC5□□□□□ -1.61
RB1P06400 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5□□□□□ -1.61
RB1P06400 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5□□□□□ -1.61
RB1P06400 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5□□□□□ -1.61
RB1P06400 AP002812.4-201ENST00000532139 286 ntBASIC5□□□□□ -1.61
RB1P06400 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5□□□□□ -1.61
RB1P06400 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5□□□□□ -1.61
RB1P06400 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5□□□□□ -1.61
RB1P06400 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5□□□□□ -1.61
RB1P06400 AC011477.5-201ENST00000586571 259 ntBASIC5□□□□□ -1.61
RB1P06400 BNIP3P22-201ENST00000593399 556 ntBASIC5□□□□□ -1.61
RB1P06400 AC133794.1-201ENST00000602731 914 ntBASIC5□□□□□ -1.61
RB1P06400 AC091979.2-201ENST00000607514 214 ntBASIC5□□□□□ -1.61
RB1P06400 AC018645.2-201ENST00000609151 472 ntBASIC5□□□□□ -1.61
RB1P06400 AC015908.5-201ENST00000623289 343 ntBASIC5□□□□□ -1.61
RB1P06400 AC010872.1-201ENST00000624225 675 ntBASIC5□□□□□ -1.61
RB1P06400 AC015813.6-201ENST00000624409 5808 ntBASIC5□□□□□ -1.61
RB1P06400 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 IQCB2P-201ENST00000401788 1633 ntBASIC5□□□□□ -1.61
RB1P06400 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5□□□□□ -1.61
RB1P06400 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RB1P06400 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5□□□□□ -1.61
RB1P06400 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RB1P06400 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RB1P06400 DDX18P3-201ENST00000404856 2007 ntBASIC4.99□□□□□ -1.61
RB1P06400 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.99□□□□□ -1.61
RB1P06400 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RB1P06400 RNA5SP28-201ENST00000363841 119 ntBASIC4.99□□□□□ -1.61
RB1P06400 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RB1P06400 SNORA37-201ENST00000384504 129 ntBASIC4.99□□□□□ -1.61
RB1P06400 RPL22P22-201ENST00000395439 379 ntBASIC4.99□□□□□ -1.61
RB1P06400 AP002784.2-201ENST00000397300 549 ntBASIC4.99□□□□□ -1.61
RB1P06400 HMGB3P31-201ENST00000413333 595 ntBASIC4.99□□□□□ -1.61
RB1P06400 RAD23BP1-201ENST00000421404 1227 ntBASIC4.99□□□□□ -1.61
RB1P06400 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.99□□□□□ -1.61
RB1P06400 RPS12P10-201ENST00000427031 377 ntBASIC4.99□□□□□ -1.61
RB1P06400 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RB1P06400 AC093422.3-201ENST00000428506 305 ntBASIC4.99□□□□□ -1.61
RB1P06400 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.99□□□□□ -1.61
RB1P06400 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.99□□□□□ -1.61
RB1P06400 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.99□□□□□ -1.61
RB1P06400 RPL7P29-201ENST00000437151 728 ntBASIC4.99□□□□□ -1.61
RB1P06400 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.99□□□□□ -1.61
RB1P06400 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.99□□□□□ -1.61
RB1P06400 AC114755.5-201ENST00000447760 831 ntBASIC4.99□□□□□ -1.61
RB1P06400 AC108463.1-201ENST00000450258 347 ntBASIC4.99□□□□□ -1.61
RB1P06400 RNU6-1218P-201ENST00000458990 108 ntBASIC4.99□□□□□ -1.61
RB1P06400 RN7SL817P-201ENST00000480777 288 ntBASIC4.99□□□□□ -1.61
RB1P06400 RNU6-347P-201ENST00000516658 105 ntBASIC4.99□□□□□ -1.61
RB1P06400 AC019227.1-201ENST00000526902 510 ntBASIC4.99□□□□□ -1.61
RB1P06400 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.99□□□□□ -1.61
RB1P06400 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.99□□□□□ -1.61
RB1P06400 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.99□□□□□ -1.61
RB1P06400 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.99□□□□□ -1.61
RB1P06400 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.99□□□□□ -1.61
RB1P06400 AL049830.4-201ENST00000555149 351 ntBASIC4.99□□□□□ -1.61
RB1P06400 AGGF1P9-201ENST00000561884 913 ntBASIC4.99□□□□□ -1.61
RB1P06400 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.99□□□□□ -1.61
RB1P06400 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.99□□□□□ -1.61
RB1P06400 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.99□□□□□ -1.61
RB1P06400 ZYXP1-201ENST00000617638 118 ntBASIC4.99□□□□□ -1.61
RB1P06400 AC139769.3-201ENST00000618383 175 ntBASIC4.99□□□□□ -1.61
RB1P06400 AL445567.2-201ENST00000618935 498 ntBASIC4.99□□□□□ -1.61
RB1P06400 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.99□□□□□ -1.61
RB1P06400 AC034229.5-201ENST00000624258 185 ntBASIC4.99□□□□□ -1.61
RB1P06400 AC132825.7-201ENST00000638744 335 ntBASIC4.99□□□□□ -1.61
RB1P06400 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RB1P06400 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
RB1P06400 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RB1P06400 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.99□□□□□ -1.61
RB1P06400 AC096656.1-201ENST00000623826 1364 ntBASIC4.99□□□□□ -1.61
RB1P06400 AL450345.1-202ENST00000605741 3881 ntBASIC4.99□□□□□ -1.61
RB1P06400 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
RB1P06400 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RB1P06400 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RB1P06400 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.98□□□□□ -1.61
RB1P06400 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
RB1P06400 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 RNU6-98P-201ENST00000384173 107 ntBASIC4.98□□□□□ -1.61
RB1P06400 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RB1P06400 RPS26P8-201ENST00000393490 348 ntBASIC4.98□□□□□ -1.61
RB1P06400 AL590762.2-201ENST00000395798 571 ntBASIC4.98□□□□□ -1.61
RB1P06400 AL445189.1-201ENST00000405722 338 ntBASIC4.98□□□□□ -1.61
RB1P06400 AL355143.1-201ENST00000407101 841 ntBASIC4.98□□□□□ -1.61
RB1P06400 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.98□□□□□ -1.61
RB1P06400 EIF4A1P1-201ENST00000420241 934 ntBASIC4.98□□□□□ -1.61
RB1P06400 RPL7AP25-201ENST00000423357 805 ntBASIC4.98□□□□□ -1.61
RB1P06400 SEC63P1-201ENST00000425785 1258 ntBASIC4.98□□□□□ -1.61
RB1P06400 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms