Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.39□□□□□ -1.71
APOEP02649 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.39□□□□□ -1.71
APOEP02649 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.39□□□□□ -1.71
APOEP02649 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.39□□□□□ -1.71
APOEP02649 AC105233.3-201ENST00000531125 744 ntBASIC4.39□□□□□ -1.71
APOEP02649 CYCSP29-201ENST00000533731 318 ntBASIC4.39□□□□□ -1.71
APOEP02649 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.39□□□□□ -1.71
APOEP02649 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.39□□□□□ -1.71
APOEP02649 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.39□□□□□ -1.71
APOEP02649 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.39□□□□□ -1.71
APOEP02649 AC239803.2-201ENST00000610161 430 ntBASIC4.39□□□□□ -1.71
APOEP02649 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
APOEP02649 MIR8059-201ENST00000620427 81 ntBASIC4.39□□□□□ -1.71
APOEP02649 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.39□□□□□ -1.71
APOEP02649 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.39□□□□□ -1.71
APOEP02649 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
APOEP02649 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.39□□□□□ -1.71
APOEP02649 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
APOEP02649 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
APOEP02649 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
APOEP02649 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
APOEP02649 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
APOEP02649 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 RHOT1P2-201ENST00000366423 333 ntBASIC4.38□□□□□ -1.71
APOEP02649 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
APOEP02649 MIR513A2-201ENST00000385249 127 ntBASIC4.38□□□□□ -1.71
APOEP02649 RPS26P8-201ENST00000393490 348 ntBASIC4.38□□□□□ -1.71
APOEP02649 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.38□□□□□ -1.71
APOEP02649 AC108145.1-201ENST00000503770 153 ntBASIC4.38□□□□□ -1.71
APOEP02649 AC099522.1-202ENST00000514718 367 ntBASIC4.38□□□□□ -1.71
APOEP02649 DEFB109D-201ENST00000529497 240 ntBASIC4.38□□□□□ -1.71
APOEP02649 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.38□□□□□ -1.71
APOEP02649 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.38□□□□□ -1.71
APOEP02649 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 AL590392.1-201ENST00000604960 446 ntBASIC4.38□□□□□ -1.71
APOEP02649 AL645927.2-201ENST00000618350 349 ntBASIC4.38□□□□□ -1.71
APOEP02649 OR52H1-202ENST00000641796 1061 ntBASIC4.38□□□□□ -1.71
APOEP02649 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
APOEP02649 Z82217.1-201ENST00000625157 8149 ntBASIC4.38□□□□□ -1.71
APOEP02649 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
APOEP02649 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
APOEP02649 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.38□□□□□ -1.71
APOEP02649 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 SNORA70C-201ENST00000384538 135 ntBASIC4.37□□□□□ -1.71
APOEP02649 ST13P16-201ENST00000401760 781 ntBASIC4.37□□□□□ -1.71
APOEP02649 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 AL590806.1-201ENST00000415818 853 ntBASIC4.37□□□□□ -1.71
APOEP02649 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.37□□□□□ -1.71
APOEP02649 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.37□□□□□ -1.71
APOEP02649 NANOGP6-201ENST00000429190 847 ntBASIC4.37□□□□□ -1.71
APOEP02649 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.37□□□□□ -1.71
APOEP02649 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.37□□□□□ -1.71
APOEP02649 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
APOEP02649 TRBV8-1-201ENST00000481590 279 ntBASIC4.37□□□□□ -1.71
APOEP02649 RPS27AP13-201ENST00000498403 237 ntBASIC4.37□□□□□ -1.71
APOEP02649 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.37□□□□□ -1.71
APOEP02649 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.37□□□□□ -1.71
APOEP02649 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.37□□□□□ -1.71
APOEP02649 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.37□□□□□ -1.71
APOEP02649 AC068446.3-201ENST00000555285 382 ntBASIC4.37□□□□□ -1.71
APOEP02649 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
APOEP02649 AC136624.4-201ENST00000573044 370 ntBASIC4.37□□□□□ -1.71
APOEP02649 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.37□□□□□ -1.71
APOEP02649 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.37□□□□□ -1.71
APOEP02649 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
APOEP02649 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.37□□□□□ -1.71
APOEP02649 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.37□□□□□ -1.71
APOEP02649 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.37□□□□□ -1.71
APOEP02649 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.37□□□□□ -1.71
APOEP02649 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
APOEP02649 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.36□□□□□ -1.71
APOEP02649 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
APOEP02649 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.36□□□□□ -1.71
APOEP02649 AC108032.1-201ENST00000416706 207 ntBASIC4.36□□□□□ -1.71
APOEP02649 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.36□□□□□ -1.71
APOEP02649 RSL24D1P6-201ENST00000426934 401 ntBASIC4.36□□□□□ -1.71
APOEP02649 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms