Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 FCF1P7-201ENST00000451185 558 ntBASIC4.82□□□□□ -1.64
COL2A1P02458 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.82□□□□□ -1.64
COL2A1P02458 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.82□□□□□ -1.64
COL2A1P02458 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.82□□□□□ -1.64
COL2A1P02458 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.82□□□□□ -1.64
COL2A1P02458 AC110743.1-201ENST00000584870 478 ntBASIC4.82□□□□□ -1.64
COL2A1P02458 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.82□□□□□ -1.64
COL2A1P02458 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.82□□□□□ -1.64
COL2A1P02458 SRGNP1-201ENST00000603392 451 ntBASIC4.82□□□□□ -1.64
COL2A1P02458 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.82□□□□□ -1.64
COL2A1P02458 AL357559.1-201ENST00000622228 274 ntBASIC4.82□□□□□ -1.64
COL2A1P02458 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
COL2A1P02458 HCFC2P1-201ENST00000392864 1592 ntBASIC4.82□□□□□ -1.64
COL2A1P02458 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.82□□□□□ -1.64
COL2A1P02458 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL2A1P02458 SNORA73.2-201ENST00000364946 201 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC117434.1-201ENST00000419971 836 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.81□□□□□ -1.64
COL2A1P02458 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.81□□□□□ -1.64
COL2A1P02458 AC018635.1-201ENST00000468292 1030 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC022336.1-201ENST00000475510 337 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.81□□□□□ -1.64
COL2A1P02458 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.81□□□□□ -1.64
COL2A1P02458 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL2A1P02458 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL2A1P02458 AC008694.2-201ENST00000517591 306 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC026403.1-201ENST00000518938 295 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC008676.3-201ENST00000521237 435 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.81□□□□□ -1.64
COL2A1P02458 AC087499.8-201ENST00000578406 226 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC115989.2-201ENST00000578640 563 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.81□□□□□ -1.64
COL2A1P02458 MIR6868-201ENST00000611215 58 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC109809.1-201ENST00000619665 545 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL2A1P02458 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.81□□□□□ -1.64
COL2A1P02458 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL2A1P02458 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL2A1P02458 AC010300.1-201ENST00000600671 5134 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.81□□□□□ -1.64
COL2A1P02458 MAPK10-303ENST00000641324 3959 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL2A1P02458 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL2A1P02458 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL2A1P02458 PTMAP5-201ENST00000393073 333 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
COL2A1P02458 SEPT7P8-201ENST00000413308 775 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.81□□□□□ -1.64
COL2A1P02458 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.81□□□□□ -1.64
COL2A1P02458 AL121878.1-201ENST00000418638 859 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.81□□□□□ -1.64
COL2A1P02458 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.81□□□□□ -1.64
COL2A1P02458 RPS11P1-201ENST00000451072 473 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 CYCSP53-201ENST00000455540 265 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 PSMC1P13-201ENST00000458195 985 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.81□□□□□ -1.64
COL2A1P02458 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL2A1P02458 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.81□□□□□ -1.64
COL2A1P02458 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.81□□□□□ -1.64
COL2A1P02458 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.81□□□□□ -1.64
COL2A1P02458 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.81□□□□□ -1.64
COL2A1P02458 MIR5685-201ENST00000579080 79 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC026979.4-201ENST00000606555 645 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC064801.1-201ENST00000612025 407 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AL121772.2-201ENST00000614331 297 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 AC099669.2-201ENST00000616549 437 ntBASIC4.81□□□□□ -1.64
COL2A1P02458 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL2A1P02458 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.8□□□□□ -1.64
COL2A1P02458 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL2A1P02458 AP001642.1-201ENST00000624727 2117 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
COL2A1P02458 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.8□□□□□ -1.64
COL2A1P02458 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL2A1P02458 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL2A1P02458 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL2A1P02458 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.8□□□□□ -1.64
COL2A1P02458 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL2A1P02458 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.8□□□□□ -1.64
COL2A1P02458 AC016588.2-201ENST00000632484 3021 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL2A1P02458 AL589826.1-201ENST00000340697 249 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 HMGB3P19-201ENST00000403971 560 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 RPS23P10-201ENST00000416185 486 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 AC073335.1-201ENST00000427776 363 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 MTCO3P17-201ENST00000443775 513 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 GXYLT1P1-201ENST00000446657 490 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.8□□□□□ -1.64
COL2A1P02458 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.8□□□□□ -1.64
COL2A1P02458 RNA5SP103-201ENST00000459503 118 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.8□□□□□ -1.64
COL2A1P02458 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.8□□□□□ -1.64
COL2A1P02458 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.8□□□□□ -1.64
COL2A1P02458 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.8□□□□□ -1.64
COL2A1P02458 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.8□□□□□ -1.64
COL2A1P02458 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms