Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.4□□□□□ -1.54
CNOT4O95628 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 DYNLL1P7-201ENST00000429273 258 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 USP12PX-201ENST00000432383 1057 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 SEPT7P5-201ENST00000434048 306 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.4□□□□□ -1.54
CNOT4O95628 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.4□□□□□ -1.54
CNOT4O95628 AL353662.1-201ENST00000439099 327 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 MTND4LP16-201ENST00000440828 295 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 RPS7P5-201ENST00000441482 581 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AL662791.1-201ENST00000441992 928 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 MTATP6P30-201ENST00000443540 664 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.4□□□□□ -1.54
CNOT4O95628 VN1R10P-201ENST00000447106 875 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 MTND3P10-201ENST00000450967 341 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.4□□□□□ -1.54
CNOT4O95628 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.4□□□□□ -1.54
CNOT4O95628 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.4□□□□□ -1.54
CNOT4O95628 RPS4XP15-201ENST00000489210 795 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AL358832.1-201ENST00000497800 389 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 DYNLL1P6-201ENST00000503440 264 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 FAM92A1P2-202ENST00000504766 877 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC060775.1-201ENST00000518241 520 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 IGHV3-32-201ENST00000519182 355 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 IGKV3D-25-201ENST00000519599 235 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.4□□□□□ -1.54
CNOT4O95628 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC007956.1-201ENST00000555623 542 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.4□□□□□ -1.54
CNOT4O95628 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC090312.2-201ENST00000582687 378 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.4□□□□□ -1.54
CNOT4O95628 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CNOT4O95628 AC006363.1-201ENST00000603806 463 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC133552.5-201ENST00000604266 540 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC096861.1-201ENST00000616652 240 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC023509.5-201ENST00000617434 807 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC009704.2-201ENST00000618739 483 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AL445670.1-201ENST00000618889 801 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.4□□□□□ -1.54
CNOT4O95628 AL137067.2-201ENST00000621202 131 ntBASIC5.4□□□□□ -1.54
CNOT4O95628 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNOT4O95628 KYNUP3-201ENST00000574386 1341 ntBASIC5.4□□□□□ -1.55
CNOT4O95628 PABPC1P9-201ENST00000426076 1612 ntBASIC5.4□□□□□ -1.55
CNOT4O95628 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNOT4O95628 AC092162.3-201ENST00000624511 1624 ntBASIC5.4□□□□□ -1.55
CNOT4O95628 AP001541.1-201ENST00000623322 1904 ntBASIC5.4□□□□□ -1.55
CNOT4O95628 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNOT4O95628 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNOT4O95628 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNOT4O95628 HSPD1P8-201ENST00000400121 1658 ntBASIC5.4□□□□□ -1.55
CNOT4O95628 HDAC1P2-201ENST00000453661 1398 ntBASIC5.4□□□□□ -1.55
CNOT4O95628 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
CNOT4O95628 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.4□□□□□ -1.55
CNOT4O95628 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNOT4O95628 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.4□□□□□ -1.55
CNOT4O95628 AC106872.5-201ENST00000508856 1416 ntBASIC5.4□□□□□ -1.55
CNOT4O95628 RARSP1-201ENST00000542842 1418 ntBASIC5.4□□□□□ -1.55
CNOT4O95628 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNOT4O95628 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 CR383658.2-201ENST00000547576 1525 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CNOT4O95628 RNU6-1339P-201ENST00000363574 91 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 RNU6-374P-201ENST00000364146 108 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CNOT4O95628 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 RNU5A-6P-201ENST00000384136 116 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 Y_RNA.582-201ENST00000391023 95 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 RNA5SP178-201ENST00000410380 128 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.39□□□□□ -1.55
CNOT4O95628 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 RPL7P30-201ENST00000420888 709 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 RPS15AP30-201ENST00000420976 390 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC079355.1-201ENST00000421770 223 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms