Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
USH2AO75445 RPL7P60-201ENST00000397636 735 ntBASIC1.74□□□□□ -2.13
USH2AO75445 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
USH2AO75445 AC011825.1-201ENST00000484967 388 ntBASIC1.74□□□□□ -2.13
USH2AO75445 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 TRAPPC2P2-201ENST00000517589 409 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC022695.1-201ENST00000522089 237 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC091178.1-203ENST00000584586 279 ntBASIC1.74□□□□□ -2.13
USH2AO75445 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 SNORD17-201ENST00000390930 237 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AL139413.1-201ENST00000421309 217 ntBASIC1.74□□□□□ -2.13
USH2AO75445 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 AC023271.1-201ENST00000445936 1090 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 BNIP3P41-201ENST00000503774 571 ntBASIC1.74□□□□□ -2.13
USH2AO75445 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC1.74□□□□□ -2.13
USH2AO75445 AC087369.1-201ENST00000520775 996 ntBASIC1.74□□□□□ -2.13
USH2AO75445 SMG1P4-204ENST00000523028 4131 ntBASIC1.74□□□□□ -2.13
USH2AO75445 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC1.74□□□□□ -2.13
USH2AO75445 AC087276.1-201ENST00000529659 480 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AL121603.1-201ENST00000553815 142 ntBASIC1.74□□□□□ -2.13
USH2AO75445 VPS35P1-201ENST00000563400 1518 ntBASIC1.74□□□□□ -2.13
USH2AO75445 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC1.74□□□□□ -2.13
USH2AO75445 AC068254.2-201ENST00000623938 3577 ntBASIC1.74□□□□□ -2.13
USH2AO75445 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC1.74□□□□□ -2.13
USH2AO75445 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 AL365440.1-201ENST00000436135 2167 ntBASIC1.74□□□□□ -2.13
USH2AO75445 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 Z97055.1-201ENST00000419730 712 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 SNORD105B-201ENST00000458770 79 ntBASIC1.74□□□□□ -2.13
USH2AO75445 RPL32P34-201ENST00000486380 400 ntBASIC1.74□□□□□ -2.13
USH2AO75445 RN7SKP244-201ENST00000516513 307 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC135001.1-201ENST00000544546 283 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC106734.1-201ENST00000568646 663 ntBASIC1.74□□□□□ -2.13
USH2AO75445 MIR5004-201ENST00000579078 107 ntBASIC1.74□□□□□ -2.13
USH2AO75445 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC1.74□□□□□ -2.13
USH2AO75445 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 AL355596.1-201ENST00000565399 3996 ntBASIC1.74□□□□□ -2.13
USH2AO75445 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 TRIM51GP-201ENST00000534741 1350 ntBASIC1.74□□□□□ -2.13
USH2AO75445 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 AL136360.1-201ENST00000503377 1900 ntBASIC1.74□□□□□ -2.13
USH2AO75445 Y_RNA.508-201ENST00000384502 114 ntBASIC1.74□□□□□ -2.13
USH2AO75445 MIR489-201ENST00000384923 84 ntBASIC1.74□□□□□ -2.13
USH2AO75445 RPL21P67-201ENST00000402896 478 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 AL161631.1-201ENST00000417933 486 ntBASIC1.74□□□□□ -2.13
USH2AO75445 EIF4A1P11-201ENST00000451239 222 ntBASIC1.74□□□□□ -2.13
USH2AO75445 CYCSP35-201ENST00000451978 304 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC1.74□□□□□ -2.13
USH2AO75445 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 AC097462.2-201ENST00000504623 481 ntBASIC1.74□□□□□ -2.13
USH2AO75445 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC1.74□□□□□ -2.13
USH2AO75445 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC1.74□□□□□ -2.13
USH2AO75445 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC1.74□□□□□ -2.13
USH2AO75445 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC1.74□□□□□ -2.13
USH2AO75445 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH2AO75445 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms