Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AP000827.1-201ENST00000527814 258 ntBASIC4.4□□□□□ -1.71
SDC3O75056 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.4□□□□□ -1.71
SDC3O75056 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.4□□□□□ -1.71
SDC3O75056 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.4□□□□□ -1.71
SDC3O75056 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.4□□□□□ -1.71
SDC3O75056 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.4□□□□□ -1.71
SDC3O75056 AC006065.6-201ENST00000625201 545 ntBASIC4.4□□□□□ -1.71
SDC3O75056 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SDC3O75056 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SDC3O75056 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SDC3O75056 PHKBP1-201ENST00000450951 1951 ntBASIC4.4□□□□□ -1.71
SDC3O75056 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SDC3O75056 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SDC3O75056 AC005261.4-201ENST00000600047 1385 ntBASIC4.4□□□□□ -1.71
SDC3O75056 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.39□□□□□ -1.71
SDC3O75056 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SDC3O75056 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.39□□□□□ -1.71
SDC3O75056 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 RNU1-94P-201ENST00000362627 173 ntBASIC4.39□□□□□ -1.71
SDC3O75056 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.39□□□□□ -1.71
SDC3O75056 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.39□□□□□ -1.71
SDC3O75056 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.39□□□□□ -1.71
SDC3O75056 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.39□□□□□ -1.71
SDC3O75056 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.39□□□□□ -1.71
SDC3O75056 ZFAND6P1-201ENST00000434138 605 ntBASIC4.39□□□□□ -1.71
SDC3O75056 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.39□□□□□ -1.71
SDC3O75056 RPL23AP43-201ENST00000446445 471 ntBASIC4.39□□□□□ -1.71
SDC3O75056 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 AC114755.5-201ENST00000447760 831 ntBASIC4.39□□□□□ -1.71
SDC3O75056 RPL7P48-201ENST00000461513 746 ntBASIC4.39□□□□□ -1.71
SDC3O75056 AC091167.1-201ENST00000492017 396 ntBASIC4.39□□□□□ -1.71
SDC3O75056 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.39□□□□□ -1.71
SDC3O75056 AC098799.1-201ENST00000504752 800 ntBASIC4.39□□□□□ -1.71
SDC3O75056 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.39□□□□□ -1.71
SDC3O75056 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.39□□□□□ -1.71
SDC3O75056 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.39□□□□□ -1.71
SDC3O75056 AC090312.1-201ENST00000580637 348 ntBASIC4.39□□□□□ -1.71
SDC3O75056 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.39□□□□□ -1.71
SDC3O75056 AC090525.3-201ENST00000605601 189 ntBASIC4.39□□□□□ -1.71
SDC3O75056 AC090948.2-201ENST00000607363 564 ntBASIC4.39□□□□□ -1.71
SDC3O75056 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.39□□□□□ -1.71
SDC3O75056 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.39□□□□□ -1.71
SDC3O75056 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.39□□□□□ -1.71
SDC3O75056 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.39□□□□□ -1.71
SDC3O75056 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SDC3O75056 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.39□□□□□ -1.71
SDC3O75056 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SDC3O75056 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.38□□□□□ -1.71
SDC3O75056 AC114546.3-201ENST00000623582 1734 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AL672167.1-205ENST00000641112 3080 ntBASIC4.38□□□□□ -1.71
SDC3O75056 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDC3O75056 OR5P1P-201ENST00000299512 925 ntBASIC4.38□□□□□ -1.71
SDC3O75056 IL6STP1-201ENST00000346911 1020 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.38□□□□□ -1.71
SDC3O75056 MIR331-201ENST00000362302 94 ntBASIC4.38□□□□□ -1.71
SDC3O75056 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SDC3O75056 AC019155.1-201ENST00000382242 574 ntBASIC4.38□□□□□ -1.71
SDC3O75056 SDHCP2-201ENST00000398565 501 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC025750.1-201ENST00000399891 379 ntBASIC4.38□□□□□ -1.71
SDC3O75056 EIF4A1P3-201ENST00000411521 244 ntBASIC4.38□□□□□ -1.71
SDC3O75056 RANP4-201ENST00000413361 655 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.38□□□□□ -1.71
SDC3O75056 RPL23AP38-201ENST00000423801 469 ntBASIC4.38□□□□□ -1.71
SDC3O75056 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.38□□□□□ -1.71
SDC3O75056 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDC3O75056 CDC27P1-201ENST00000445384 715 ntBASIC4.38□□□□□ -1.71
SDC3O75056 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
SDC3O75056 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.38□□□□□ -1.71
SDC3O75056 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.38□□□□□ -1.71
SDC3O75056 RPL23AP12-201ENST00000467573 473 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC041039.1-201ENST00000485656 536 ntBASIC4.38□□□□□ -1.71
SDC3O75056 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SDC3O75056 SUMO1P1-201ENST00000497904 306 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.38□□□□□ -1.71
SDC3O75056 MIR2116-201ENST00000517221 80 ntBASIC4.38□□□□□ -1.71
SDC3O75056 HMGB1P46-201ENST00000520062 610 ntBASIC4.38□□□□□ -1.71
SDC3O75056 SMARCE1P4-201ENST00000523647 241 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.38□□□□□ -1.71
SDC3O75056 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.38□□□□□ -1.71
SDC3O75056 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.38□□□□□ -1.71
SDC3O75056 AC025884.1-201ENST00000556034 378 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.38□□□□□ -1.71
SDC3O75056 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.38□□□□□ -1.71
SDC3O75056 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.38□□□□□ -1.71
SDC3O75056 AC242628.1-201ENST00000606810 391 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC011472.4-201ENST00000615848 491 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC245389.2-201ENST00000616023 576 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC131238.1-201ENST00000617135 328 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC139769.3-201ENST00000618383 175 ntBASIC4.38□□□□□ -1.71
SDC3O75056 AC242843.1-201ENST00000618702 573 ntBASIC4.38□□□□□ -1.71
SDC3O75056 MIR3653-201ENST00000625572 110 ntBASIC4.38□□□□□ -1.71
SDC3O75056 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 304 ms