Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 METTL15P1-201ENST00000481421 1045 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.35□□□□□ -1.71
PRKNO60260 OR5AK3P-201ENST00000527486 1297 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.35□□□□□ -1.71
PRKNO60260 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.35□□□□□ -1.71
PRKNO60260 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.35□□□□□ -1.71
PRKNO60260 AC068993.1-201ENST00000546724 589 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.35□□□□□ -1.71
PRKNO60260 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.35□□□□□ -1.71
PRKNO60260 AC087897.1-201ENST00000550134 156 ntBASIC4.35□□□□□ -1.71
PRKNO60260 CR383656.6-201ENST00000550518 394 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.35□□□□□ -1.71
PRKNO60260 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.35□□□□□ -1.71
PRKNO60260 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.35□□□□□ -1.71
PRKNO60260 AC008745.1-201ENST00000604064 271 ntBASIC4.35□□□□□ -1.71
PRKNO60260 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.35□□□□□ -1.71
PRKNO60260 AP000484.1-201ENST00000620067 1252 ntBASIC4.35□□□□□ -1.71
PRKNO60260 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.35□□□□□ -1.71
PRKNO60260 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PRKNO60260 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.35□□□□□ -1.71
PRKNO60260 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.35□□□□□ -1.71
PRKNO60260 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.35□□□□□ -1.71
PRKNO60260 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
PRKNO60260 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.35□□□□□ -1.71
PRKNO60260 VPS35P1-201ENST00000563400 1518 ntBASIC4.35□□□□□ -1.71
PRKNO60260 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.35□□□□□ -1.71
PRKNO60260 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.34□□□□□ -1.71
PRKNO60260 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.34□□□□□ -1.71
PRKNO60260 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.34□□□□□ -1.71
PRKNO60260 RN7SKP74-201ENST00000362849 309 ntBASIC4.34□□□□□ -1.71
PRKNO60260 RNU6-666P-201ENST00000363499 107 ntBASIC4.34□□□□□ -1.71
PRKNO60260 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
PRKNO60260 SNORA70F-201ENST00000384142 135 ntBASIC4.34□□□□□ -1.71
PRKNO60260 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
PRKNO60260 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 Y_RNA.625-201ENST00000411256 107 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AC119751.6-201ENST00000416712 186 ntBASIC4.34□□□□□ -1.71
PRKNO60260 VPS26BP1-201ENST00000417155 755 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 MTND2P16-201ENST00000419987 799 ntBASIC4.34□□□□□ -1.71
PRKNO60260 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.34□□□□□ -1.71
PRKNO60260 AC246680.2-201ENST00000422106 389 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.34□□□□□ -1.71
PRKNO60260 GTF2IP3-201ENST00000433887 494 ntBASIC4.34□□□□□ -1.71
PRKNO60260 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.34□□□□□ -1.71
PRKNO60260 VN1R25P-201ENST00000443385 738 ntBASIC4.34□□□□□ -1.71
PRKNO60260 TDGF1P1-201ENST00000445734 527 ntBASIC4.34□□□□□ -1.71
PRKNO60260 SEPT14P24-201ENST00000447236 180 ntBASIC4.34□□□□□ -1.71
PRKNO60260 OR51B8P-201ENST00000449892 769 ntBASIC4.34□□□□□ -1.71
PRKNO60260 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.34□□□□□ -1.71
PRKNO60260 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PRKNO60260 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 AC096741.1-201ENST00000472250 846 ntBASIC4.34□□□□□ -1.71
PRKNO60260 RPL36AP41-201ENST00000493820 306 ntBASIC4.34□□□□□ -1.71
PRKNO60260 MTCYBP35-201ENST00000503630 1137 ntBASIC4.34□□□□□ -1.71
PRKNO60260 HMGB3P16-201ENST00000508037 287 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 RNA5SP303-201ENST00000516192 130 ntBASIC4.34□□□□□ -1.71
PRKNO60260 RNU6-1004P-201ENST00000516584 111 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.34□□□□□ -1.71
PRKNO60260 NDUFS5P6-201ENST00000529136 295 ntBASIC4.34□□□□□ -1.71
PRKNO60260 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PRKNO60260 SETP1-201ENST00000556014 845 ntBASIC4.34□□□□□ -1.71
PRKNO60260 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.34□□□□□ -1.71
PRKNO60260 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.34□□□□□ -1.71
PRKNO60260 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.34□□□□□ -1.71
PRKNO60260 AC234771.5-201ENST00000600161 514 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.34□□□□□ -1.71
PRKNO60260 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.34□□□□□ -1.71
PRKNO60260 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.34□□□□□ -1.71
PRKNO60260 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.34□□□□□ -1.71
PRKNO60260 Z99289.3-201ENST00000605586 594 ntBASIC4.34□□□□□ -1.71
PRKNO60260 OR2BH1P-201ENST00000608850 864 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AC096586.1-201ENST00000610267 561 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AC015914.2-201ENST00000618167 288 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AP001005.3-201ENST00000622049 129 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AL355578.1-201ENST00000607405 1328 ntBASIC4.34□□□□□ -1.71
PRKNO60260 AC107068.1-201ENST00000563286 4218 ntBASIC4.34□□□□□ -1.71
PRKNO60260 CASC19-206ENST00000641028 1430 ntBASIC4.34□□□□□ -1.71
PRKNO60260 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRKNO60260 AC025574.1-201ENST00000554784 1653 ntBASIC4.34□□□□□ -1.71
PRKNO60260 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
PRKNO60260 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PRKNO60260 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms