Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC009597.2-201ENST00000604659 592 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.21□□□□□ -1.58
PHGDHO43175 AL354760.1-201ENST00000608357 643 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC116447.1-201ENST00000613153 453 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC073348.1-201ENST00000623002 331 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AL359757.1-201ENST00000623176 255 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AL512506.2-201ENST00000624472 458 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AP003072.4-201ENST00000624580 310 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC007671.2-201ENST00000637344 619 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PHGDHO43175 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC114947.2-201ENST00000565748 2125 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC097063.1-201ENST00000426714 1797 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 OR56B2P-201ENST00000317102 954 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PHGDHO43175 AC005294.1-201ENST00000355509 281 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 Y_RNA.311-201ENST00000365068 96 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 SKINT1L-201ENST00000401057 817 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AL590084.2-201ENST00000401481 382 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 PRRC2CP1-201ENST00000404428 159 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 RNA5SP487-201ENST00000410186 122 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 RNU6-603P-201ENST00000411403 107 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AL136133.1-201ENST00000413694 376 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.2□□□□□ -1.58
PHGDHO43175 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 MGAT2P2-201ENST00000427194 797 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AL513175.1-201ENST00000431492 780 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 KATNBL1P3-201ENST00000443475 909 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AP000281.1-201ENST00000444036 316 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 YWHAEP1-201ENST00000453697 763 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 RPS15AP1-201ENST00000457423 391 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 RPL21P71-201ENST00000465598 459 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.2□□□□□ -1.58
PHGDHO43175 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 RN7SKP31-201ENST00000516354 278 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 HMGB1P40-201ENST00000525121 540 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
PHGDHO43175 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
PHGDHO43175 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PHGDHO43175 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 AC090888.1-201ENST00000561335 1141 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 AC010620.1-201ENST00000601088 1102 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 AC008814.1-201ENST00000603797 406 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AC121247.2-201ENST00000604776 136 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AC015982.1-201ENST00000608113 465 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AC005332.6-201ENST00000613178 446 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 AC010608.2-201ENST00000624830 470 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.2□□□□□ -1.58
PHGDHO43175 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.2□□□□□ -1.58
PHGDHO43175 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.2□□□□□ -1.58
PHGDHO43175 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PHGDHO43175 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 AL513185.3-201ENST00000433335 1300 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 ZNF542P-204ENST00000482727 1305 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms