Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 OR4K15-201ENST00000305051 1216 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 OR52B1P-201ENST00000316506 909 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 RNU1-82P-201ENST00000390851 165 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 DYNLL1P7-201ENST00000429273 258 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 BTF3P6-201ENST00000448054 499 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AL096803.2-201ENST00000450032 677 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AL935212.3-201ENST00000450729 284 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 CCDC75P1-201ENST00000469247 791 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC093267.1-201ENST00000489176 961 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC010285.3-201ENST00000511668 676 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 RNU1-6P-201ENST00000516290 144 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 HMGB1P23-201ENST00000518743 568 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 RN7SL802P-201ENST00000577858 299 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 MIR5699-201ENST00000578903 90 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 MIR4697-201ENST00000582977 78 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 VN1R84P-201ENST00000593697 235 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC125494.3-201ENST00000602759 455 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 BNIP3P31-201ENST00000604515 566 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AL355816.1-201ENST00000607951 118 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC131238.1-201ENST00000617135 328 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AL731566.2-201ENST00000618971 317 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 SMG1P6-201ENST00000532337 2930 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 TLK1P1-201ENST00000456760 2440 ntBASIC4.3□□□□□ -1.72
NPIPA3F8WFD2 AC025574.1-201ENST00000554784 1653 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC091046.3-201ENST00000631455 1574 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 ENSAP3-201ENST00000312710 333 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 SNORA62-201ENST00000365493 153 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 RPL22P22-201ENST00000395439 379 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AL035405.1-201ENST00000400795 710 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AL049697.2-201ENST00000403708 294 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 ATG4AP1-201ENST00000416893 538 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 TMBIM7P-201ENST00000418074 855 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 LINC00993-201ENST00000420453 540 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC073310.1-201ENST00000423226 1033 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 RGS17P1-201ENST00000423358 553 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 CNOT7P1-201ENST00000429006 852 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 TPT1P3-201ENST00000492841 512 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 RNA5SP303-201ENST00000516192 130 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AF186190.1-201ENST00000517470 480 ntBASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA3F8WFD2 AC083923.1-201ENST00000523708 376 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms