Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 NPM1P47-201ENST00000560843 856 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AC022726.1-201ENST00000587475 207 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 AC009039.2-201ENST00000624524 529 ntBASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TCRBV7S3A2A0A539 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
TCRBV7S3A2A0A539 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TCRBV7S3A2A0A539 AC007342.5-201ENST00000571340 2142 ntBASIC4.84□□□□□ -1.64
TCRBV7S3A2A0A539 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TCRBV7S3A2A0A539 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC005261.4-201ENST00000600047 1385 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC108751.5-201ENST00000492880 1336 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 RNU1-82P-201ENST00000390851 165 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AL590762.2-201ENST00000395798 571 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 SNORA11C-201ENST00000408532 129 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 RNU6-77P-201ENST00000410554 91 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 OR2B7P-201ENST00000429302 934 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 RPS24P8-201ENST00000431490 402 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 HMGB1P45-201ENST00000435986 653 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC092647.3-201ENST00000443044 633 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 RPS26P30-201ENST00000443431 335 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 Z83846.1-201ENST00000446798 265 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 RPL7AP52-201ENST00000458096 790 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 TRBV8-2-201ENST00000475637 270 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 MTND2P14-201ENST00000482139 351 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC091868.1-201ENST00000508746 304 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AL358913.1-201ENST00000554342 121 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AP001269.3-201ENST00000588718 329 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AP001542.2-201ENST00000593141 364 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 COX6CP4-201ENST00000605798 228 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC234782.5-201ENST00000617723 324 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 MIR6729-201ENST00000618194 65 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AP002967.1-201ENST00000624203 539 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC125336.1-201ENST00000508893 2827 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC097063.1-201ENST00000426714 1797 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 AC000367.1-201ENST00000452711 1766 ntBASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TCRBV7S3A2A0A539 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms