Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC015712.7-201ENST00000615211 635 ntBASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 AC037198.3-201ENST00000616754 526 ntBASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 AC005618.4-201ENST00000625053 554 ntBASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHGA3Q9Y5H0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC130304.1-201ENST00000622942 2385 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 PABPC1P6-201ENST00000445594 1829 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 RNA5SP319-201ENST00000362768 119 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU6-171P-201ENST00000384354 107 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU6-603P-201ENST00000411403 107 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 FCF1P2-201ENST00000415284 583 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 LUZP4P1-201ENST00000415420 344 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC062016.2-201ENST00000420950 676 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AL133173.1-201ENST00000423458 397 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC019178.2-201ENST00000423595 505 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 IFNNP1-201ENST00000429219 553 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC008072.1-201ENST00000434254 824 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AL590103.1-201ENST00000434488 307 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 MTCYBP39-201ENST00000437562 491 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 RAB11AP1-201ENST00000442978 646 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU1-88P-201ENST00000459274 128 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 RPL7P39-201ENST00000481157 744 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 ATP1B1P1-201ENST00000509767 915 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 MIR2117-201ENST00000516780 80 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC096996.1-201ENST00000563813 325 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 DPRXP4-201ENST00000578053 568 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC006115.2-201ENST00000596823 202 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AP000811.1-201ENST00000603803 651 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 SUGT1P3-202ENST00000604259 383 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC010738.1-201ENST00000604970 987 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC012557.2-201ENST00000605919 418 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC072039.2-201ENST00000608883 439 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC245297.2-201ENST00000610119 565 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC122108.2-201ENST00000611946 526 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AC092140.2-201ENST00000618027 521 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AL607023.1-201ENST00000620045 248 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AF246928.1-201ENST00000623768 87 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 AP001029.2-203ENST00000589795 4910 ntBASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA3Q9Y5H0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF37BP-203ENST00000452306 1352 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU6-251P-201ENST00000363235 104 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms