Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL590290.1-201ENST00000405336 380 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AL353692.2-201ENST00000407054 335 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC234779.1-201ENST00000425910 285 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 MTND4LP7-201ENST00000431728 294 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC245047.2-201ENST00000441060 530 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AP000926.1-201ENST00000479573 241 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AL161747.1-201ENST00000480068 358 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC068305.1-201ENST00000497406 726 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC023050.1-201ENST00000498198 304 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 SCARNA21.2-201ENST00000516600 166 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 UBTFL9-201ENST00000534504 1148 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 NF1P5-201ENST00000588287 448 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AP003117.1-201ENST00000602771 554 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 BPIFA4P-203ENST00000603168 689 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC000123.2-201ENST00000623124 461 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 CFTRP2-201ENST00000634304 199 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC097504.1-201ENST00000515103 2415 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 AC108467.2-201ENST00000617640 1597 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 MFSD8-242ENST00000641690 4199 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 MTND4P31-201ENST00000425607 1343 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC092162.3-201ENST00000624511 1624 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 MIR223-201ENST00000385204 110 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 MIR1286-201ENST00000408112 78 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 RPL30P3-201ENST00000424262 333 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 CDY14P-201ENST00000431260 1014 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 PRELID3BP10-201ENST00000431957 584 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 CDY12P-201ENST00000440679 1015 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AL353093.1-201ENST00000441292 436 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 CDY13P-201ENST00000445813 1015 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 RPL31P44-201ENST00000447680 377 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 CDY23P-201ENST00000451661 1014 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC023141.9-201ENST00000458734 412 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC104763.1-201ENST00000475274 360 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 RPS18P6-201ENST00000476880 458 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 OR52A4P-202ENST00000481634 799 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AK6-203ENST00000502819 743 ntTSL 5 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 GAPDHP56-201ENST00000506031 988 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 MTATP6P1-201ENST00000514057 681 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC005363.1-201ENST00000530779 351 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 OR4U1P-201ENST00000554958 912 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 SNORD95-201ENST00000579879 68 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC040174.2-201ENST00000602701 465 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC010201.1-201ENST00000605051 540 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC010857.1-201ENST00000606398 594 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC003001.2-201ENST00000616294 831 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 U6.48-201ENST00000618523 106 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AL139811.1-201ENST00000424779 2299 ntBASIC3.74□□□□□ -1.81
KCNIP3Q9Y2W7 AC017007.4-201ENST00000503353 1352 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms