Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 AC104978.1-201ENST00000449387 391 ntBASIC5.09□□□□□ -1.59
SCN11AQ9UI33 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.09□□□□□ -1.59
SCN11AQ9UI33 AL645927.2-201ENST00000618350 349 ntBASIC5.09□□□□□ -1.59
SCN11AQ9UI33 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 AC125336.1-201ENST00000508893 2827 ntBASIC5.09□□□□□ -1.59
SCN11AQ9UI33 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN11AQ9UI33 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 RN7SKP74-201ENST00000362849 309 ntBASIC5.09□□□□□ -1.6
SCN11AQ9UI33 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 TCEA1P2-201ENST00000420496 906 ntBASIC5.09□□□□□ -1.6
SCN11AQ9UI33 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 HIGD1AP4-201ENST00000430194 280 ntBASIC5.09□□□□□ -1.6
SCN11AQ9UI33 AC007688.1-201ENST00000475592 759 ntBASIC5.09□□□□□ -1.6
SCN11AQ9UI33 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.09□□□□□ -1.6
SCN11AQ9UI33 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.08□□□□□ -1.6
SCN11AQ9UI33 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 SOD2P1-201ENST00000396543 562 ntBASIC5.08□□□□□ -1.6
SCN11AQ9UI33 VDAC2P1-201ENST00000399358 958 ntBASIC5.08□□□□□ -1.6
SCN11AQ9UI33 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 Z74696.2-201ENST00000436514 498 ntBASIC5.08□□□□□ -1.6
SCN11AQ9UI33 AC005008.1-201ENST00000456151 612 ntBASIC5.08□□□□□ -1.6
SCN11AQ9UI33 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 AC244505.7-201ENST00000599675 272 ntBASIC5.08□□□□□ -1.6
SCN11AQ9UI33 AC019176.2-201ENST00000611579 315 ntBASIC5.08□□□□□ -1.6
SCN11AQ9UI33 AC005344.1-201ENST00000613391 459 ntBASIC5.08□□□□□ -1.6
SCN11AQ9UI33 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCN11AQ9UI33 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 AP002001.2-201ENST00000529025 1469 ntBASIC5.07□□□□□ -1.6
SCN11AQ9UI33 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 MIR218-2-201ENST00000385006 110 ntBASIC5.07□□□□□ -1.6
SCN11AQ9UI33 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 RPL12P18-201ENST00000437175 325 ntBASIC5.07□□□□□ -1.6
SCN11AQ9UI33 RPL31P61-201ENST00000496160 376 ntBASIC5.07□□□□□ -1.6
SCN11AQ9UI33 UBE2CP3-201ENST00000502715 450 ntBASIC5.07□□□□□ -1.6
SCN11AQ9UI33 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 AC007066.2-202ENST00000566531 914 ntBASIC5.07□□□□□ -1.6
SCN11AQ9UI33 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 AC079684.1-201ENST00000621405 437 ntBASIC5.07□□□□□ -1.6
SCN11AQ9UI33 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 CASC19-284ENST00000642142 1868 ntBASIC5.07□□□□□ -1.6
SCN11AQ9UI33 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN11AQ9UI33 MIR199A2-201ENST00000385289 110 ntBASIC5.06□□□□□ -1.6
SCN11AQ9UI33 REREP1Y-201ENST00000422655 198 ntBASIC5.06□□□□□ -1.6
SCN11AQ9UI33 REREP2Y-201ENST00000439103 200 ntBASIC5.06□□□□□ -1.6
SCN11AQ9UI33 RANP8-201ENST00000444720 713 ntBASIC5.06□□□□□ -1.6
SCN11AQ9UI33 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN11AQ9UI33 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms