Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC006326.1-201ENST00000445465 787 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC073587.1-201ENST00000447093 876 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC108022.1-201ENST00000493466 478 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 RPL30P11-201ENST00000495304 339 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 FTH1P24-201ENST00000503502 462 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC083829.1-201ENST00000503756 657 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 COX6B1P6-201ENST00000522347 255 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC233266.2-201ENST00000567067 528 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC027455.1-201ENST00000574104 594 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 RN7SL690P-201ENST00000582087 240 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC091178.1-203ENST00000584586 279 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC100827.5-201ENST00000615883 426 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC245389.2-201ENST00000616023 576 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC243756.2-201ENST00000618406 463 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC242843.1-201ENST00000618702 573 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 AC090617.9-201ENST00000623751 147 ntBASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHRNA9Q9UGM1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 AC006971.1-201ENST00000407916 4486 ntBASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.15□□□□□ -1.74
CHRNA9Q9UGM1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 RNA5SP397-201ENST00000391323 118 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 SDHCP2-201ENST00000398565 501 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 OR1F12-201ENST00000402365 945 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 RN7SKP106-201ENST00000410832 272 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 LINC01347-201ENST00000417964 355 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 MTND2P15-201ENST00000418575 892 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 MTCO3P4-201ENST00000419236 787 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 RPL36AP15-201ENST00000444514 266 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC010326.1-201ENST00000462726 602 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 PRELID3BP7-201ENST00000503606 469 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 HMGB3P13-201ENST00000511263 607 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC063949.1-201ENST00000552900 865 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 RN7SL176P-201ENST00000580352 264 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC007448.1-201ENST00000582714 234 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC067852.4-201ENST00000590314 478 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC023762.1-201ENST00000603280 584 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AL392112.1-201ENST00000605115 829 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC079791.1-201ENST00000605356 973 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC008966.2-201ENST00000606157 453 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC026979.4-201ENST00000606555 645 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AL161616.1-201ENST00000611867 286 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 KARSP3-201ENST00000571212 1504 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AC125257.1-201ENST00000560400 2930 ntBASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.15□□□□□ -1.75
CHRNA9Q9UGM1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHRNA9Q9UGM1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.14□□□□□ -1.75
CHRNA9Q9UGM1 AL137100.1-201ENST00000556703 1620 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms