Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNA5SP179-201ENST00000517284 121 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 TVP23BP1-201ENST00000557500 617 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 AC233280.2-201ENST00000603917 1070 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 MIR7151-201ENST00000617477 60 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 AL669942.2-201ENST00000620352 697 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 AP005264.7-201ENST00000625003 745 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 AC018529.3-201ENST00000624212 2254 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 KPNA2P2-201ENST00000419546 1489 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AL160275.2-201ENST00000412010 394 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 TRGV5P-201ENST00000419915 354 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 GOT2P5-201ENST00000433995 546 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 RPL7L1P1-201ENST00000448259 785 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 RPL38P1-201ENST00000460914 211 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 RN7SL542P-201ENST00000467147 294 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 RN7SKP83-201ENST00000516512 178 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 RNU6-964P-201ENST00000516524 69 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AP003730.1-201ENST00000524605 285 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AL139395.1-201ENST00000603662 160 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AL121772.2-201ENST00000614331 297 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AC090246.1-201ENST00000616499 426 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AC027228.2-201ENST00000567141 2154 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 OR4G1P-202ENST00000641173 1788 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 AP000542.2-201ENST00000623199 6179 ntBASIC3.89□□□□□ -1.79
CCDC88CQ9P219 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC88CQ9P219 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RNA5SP175-201ENST00000364275 119 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RNA5SP130-201ENST00000364431 114 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RNA5SP171-201ENST00000391071 115 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC233289.1-201ENST00000403700 508 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 TRIM60P17-201ENST00000415181 719 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RCC2P2-201ENST00000422174 918 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 HMGB3P5-201ENST00000428894 612 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RPS17P13-201ENST00000448974 407 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RN7SL132P-201ENST00000478131 296 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RPS26P15-201ENST00000488067 348 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC064801.1-201ENST00000612025 407 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC009237.17-201ENST00000618111 748 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC019278.1-201ENST00000623516 479 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC010608.2-201ENST00000624830 470 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RN7SKP156-201ENST00000410308 342 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AL139247.1-201ENST00000422768 325 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 ELOCP8-201ENST00000439309 332 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 ELOCP15-201ENST00000442090 332 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 RPS20P4-201ENST00000461659 355 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AL592156.1-201ENST00000508758 304 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 IGHV3-63-201ENST00000518422 341 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 IGKV2D-10-201ENST00000520194 281 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AGGF1P6-201ENST00000569213 976 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC053481.4-201ENST00000583164 216 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 AC099676.1-201ENST00000608886 657 ntBASIC3.88□□□□□ -1.79
CCDC88CQ9P219 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC88CQ9P219 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 VPS35P1-201ENST00000563400 1518 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AL050305.1-201ENST00000399993 1230 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms