Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC022080.2-201ENST00000452932 533 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC016724.1-201ENST00000453215 421 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 MTCO3P10-201ENST00000455912 772 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-1218P-201ENST00000458990 108 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC078785.3-201ENST00000476607 425 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC012181.1-201ENST00000479895 423 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC025674.1-201ENST00000507074 324 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-1003P-201ENST00000517099 105 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 IGLVV-66-201ENST00000523818 341 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 BNIP3P6-201ENST00000549284 499 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC026464.5-201ENST00000562497 722 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 MIR4680-201ENST00000580906 66 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AL133338.2-201ENST00000604292 736 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC090510.2-201ENST00000617465 629 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC135068.12-201ENST00000637370 931 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 MAPK10-365ENST00000641902 3825 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 MAPK10-287ENST00000641217 3037 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC119674.1-204ENST00000641348 1343 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CUEDC1Q9NWM3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CUEDC1Q9NWM3 AC110597.1-201ENST00000562669 3176 ntBASIC6.71□□□□□ -1.33
CUEDC1Q9NWM3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
CUEDC1Q9NWM3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CUEDC1Q9NWM3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.71□□□□□ -1.33
CUEDC1Q9NWM3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.71□□□□□ -1.33
CUEDC1Q9NWM3 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.71□□□□□ -1.33
CUEDC1Q9NWM3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 RPL24P4-201ENST00000326586 421 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 Y_RNA.158-201ENST00000363651 101 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-379P-201ENST00000363813 104 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 Y_RNA.176-201ENST00000363815 109 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 RN7SKP6-201ENST00000364795 319 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-308P-201ENST00000390957 107 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC068050.1-201ENST00000394891 380 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 MTCYBP4-201ENST00000401524 249 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AL136116.1-201ENST00000403591 381 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC127391.1-201ENST00000411737 98 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AL672212.1-201ENST00000422246 400 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 RPS16P9-201ENST00000477220 427 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 RN7SKP11-201ENST00000517018 287 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC008562.1-201ENST00000521763 330 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC022861.1-201ENST00000522981 663 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 COPS8P3-201ENST00000526024 482 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AP000889.2-201ENST00000532684 490 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC009117.1-201ENST00000563948 554 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 MIR5682-201ENST00000584864 76 ntBASIC6.71□□□□□ -1.34
CUEDC1Q9NWM3 MIR4428-201ENST00000584884 73 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms