Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 METTL21EP-201ENST00000298105 713 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AL121657.1-201ENST00000327215 531 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AL512430.2-201ENST00000406786 339 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 RPS3AP24-201ENST00000407896 734 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 MTCO2P19-201ENST00000427513 598 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 ST13P20-201ENST00000447996 1065 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 MTCO3P38-201ENST00000468910 766 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC116337.2-201ENST00000477662 156 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 RN7SL346P-201ENST00000491561 294 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 MTND2P33-201ENST00000506452 1031 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 EEF1B2P4-201ENST00000551398 348 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 OR4G1P-201ENST00000588632 938 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC009220.3-201ENST00000604318 586 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC092354.1-201ENST00000606057 376 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC012409.3-201ENST00000611343 981 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC109583.2-201ENST00000617367 129 ntBASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM7Q9NR12 SEC63P2-201ENST00000503863 1939 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 SNX18P3-202ENST00000565670 1750 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AL359955.1-201ENST00000455242 3275 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 RN7SKP104-201ENST00000362605 328 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 RN7SKP33-201ENST00000410942 340 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 RNA5SP498-201ENST00000411342 120 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 FNDC3CP-201ENST00000420795 1155 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 CYCSP46-201ENST00000423569 204 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 RIMKLBP2-201ENST00000424737 654 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC010975.2-201ENST00000427781 588 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AL121601.2-201ENST00000438019 707 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 snoU13.29-201ENST00000459370 104 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC072039.1-201ENST00000477611 581 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 HMGB1P40-201ENST00000525121 540 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 OR4A43P-201ENST00000532938 908 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 ZNF519P3-201ENST00000557158 1032 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC018552.1-201ENST00000562099 811 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms