Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
UPF2Q9HAU5 HSPD1P11-201ENST00000508643 1702 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 NOL8P1-201ENST00000508336 3529 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 ZNF603P-201ENST00000405613 487 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 RN7SKP278-201ENST00000410504 342 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 RN7SKP56-201ENST00000410513 331 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 MTND2P15-201ENST00000418575 892 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 UQCRBP1-201ENST00000421129 336 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 PSMD10P3-201ENST00000437000 448 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC073648.4-201ENST00000442655 781 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 HMGB3P22-202ENST00000451823 572 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 RPL23AP81-201ENST00000455252 467 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC107015.1-201ENST00000466902 747 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 RPS29P19-201ENST00000479709 171 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 HMGN1P15-201ENST00000513870 295 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC117525.1-201ENST00000515228 503 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AP000676.2-201ENST00000529711 301 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 MIR3934-201ENST00000579806 107 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AL355802.4-201ENST00000607635 548 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC006249.1-201ENST00000621223 471 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AP005264.7-201ENST00000625003 745 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AC107021.2-201ENST00000567714 2095 ntBASIC5.14□□□□□ -1.59
UPF2Q9HAU5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
UPF2Q9HAU5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 MAPK10-253ENST00000641010 4072 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 DDX18P3-201ENST00000404856 2007 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC008033.1-201ENST00000216407 1162 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 RNU4-39P-201ENST00000362455 127 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 RNU1-130P-201ENST00000363930 160 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 MIR105-2-201ENST00000385083 81 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 RAC1P3-201ENST00000416129 580 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 RPL7AP25-201ENST00000423357 805 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 MTND4LP14-201ENST00000429447 288 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 GXYLT1P1-201ENST00000446657 490 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 HMGB1P16-201ENST00000447155 540 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 RPL23AP71-201ENST00000470966 469 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC069499.1-201ENST00000489433 509 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC008638.1-201ENST00000506035 866 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AC068020.1-201ENST00000594215 661 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AL671309.1-201ENST00000603750 544 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AP003392.5-201ENST00000607857 415 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 MIR7155-201ENST00000615925 56 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 LINC00216-201ENST00000623548 1126 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF2Q9HAU5 AL606537.1-201ENST00000607258 2011 ntBASIC5.13□□□□□ -1.59
UPF2Q9HAU5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.12□□□□□ -1.59
UPF2Q9HAU5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.12□□□□□ -1.59
UPF2Q9HAU5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.12□□□□□ -1.59
UPF2Q9HAU5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms