Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 MIR4286-201ENST00000580651 93 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AL139395.1-201ENST00000603662 160 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AL713998.2-201ENST00000604538 1198 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 RNU4-89P-201ENST00000607443 133 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AC006133.1-201ENST00000617106 264 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AL672167.2-201ENST00000377164 879 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 RPL21P65-201ENST00000406094 466 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 RPL6P29-201ENST00000414863 865 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 RPS23P10-201ENST00000416185 486 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 TRGV7-201ENST00000427089 353 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AC006946.1-201ENST00000429106 328 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 BTG3P1-201ENST00000435859 716 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 VN1R105P-201ENST00000486595 910 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 BNIP3P41-201ENST00000503774 571 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 SNORA67.7-201ENST00000516664 135 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 TVP23BP1-201ENST00000557500 617 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 AC067931.1-201ENST00000624190 671 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 CDRT1-208ENST00000630868 794 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 KPNA2P2-201ENST00000419546 1489 ntBASIC5.11□□□□□ -1.59
RPAP1Q9BWH6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC011503.2-201ENST00000594230 1500 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC233289.1-201ENST00000403700 508 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 HMGB3P9-201ENST00000441799 583 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 OR52Y1P-201ENST00000452418 828 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 RPL7P22-201ENST00000466005 733 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC105233.3-201ENST00000531125 744 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 MIR4444-1-201ENST00000581696 74 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 MIR3158-1-201ENST00000583596 81 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 MIR4444-2-201ENST00000584390 74 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 AC112484.5-201ENST00000624189 228 ntBASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.1□□□□□ -1.59
RPAP1Q9BWH6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AC092111.2-201ENST00000611627 1414 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 RNA5SP130-201ENST00000364431 114 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 RNA5SP513-201ENST00000364648 118 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 ENSAP1-201ENST00000392855 326 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 MIR1179-201ENST00000408703 91 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 RNA5SP44-201ENST00000410446 133 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AL121578.1-201ENST00000428051 892 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AL356276.2-201ENST00000435919 558 ntBASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.09□□□□□ -1.59
RPAP1Q9BWH6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms