Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 TRIM77BP-201ENST00000524985 1119 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC130365.2-201ENST00000525882 1201 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC091078.2-201ENST00000557145 559 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 DPPA2P4-201ENST00000563717 878 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AL138895.2-201ENST00000603019 178 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC015871.2-201ENST00000603605 948 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AP001506.1-201ENST00000615444 211 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AL603839.4-201ENST00000624658 1005 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AL132640.3-201ENST00000630473 177 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC068137.3-201ENST00000639191 341 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC073869.6-201ENST00000640656 341 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC006511.3-201ENST00000624929 1783 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC011504.1-201ENST00000623331 4103 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 RN7SKP144-201ENST00000411108 279 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC073614.1-201ENST00000438690 650 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC244505.5-201ENST00000443639 207 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 Z82190.1-201ENST00000454534 490 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 MTCO1P42-201ENST00000457379 726 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC104763.1-201ENST00000475274 360 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC138853.1-201ENST00000503549 823 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AF213884.2-201ENST00000510417 903 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC090958.1-201ENST00000511122 351 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 RN7SKP277-201ENST00000516895 283 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 WBP1LP3-201ENST00000523033 208 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC068993.1-201ENST00000546724 589 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC010857.1-201ENST00000606398 594 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC092794.1-201ENST00000612734 582 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 AC026368.1-201ENST00000614934 690 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 MIR7159-201ENST00000620587 66 ntBASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.85□□□□□ -1.31
TRAIPQ9BWF2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AC123769.1-201ENST00000530992 3192 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 RNU6-744P-201ENST00000365557 107 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 RNU6-259P-201ENST00000383999 107 ntBASIC6.84□□□□□ -1.31
TRAIPQ9BWF2 RNU6-1316P-201ENST00000384242 108 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms