Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU1-33P-201ENST00000364249 162 ntBASIC6.58□□□□□ -1.36
IFT140Q96RY7 AC234772.1-201ENST00000377927 937 ntBASIC6.58□□□□□ -1.36
IFT140Q96RY7 AC097713.2-201ENST00000430199 356 ntBASIC6.58□□□□□ -1.36
IFT140Q96RY7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 AC092641.1-201ENST00000440229 772 ntBASIC6.58□□□□□ -1.36
IFT140Q96RY7 MTND1P6-201ENST00000523621 946 ntBASIC6.58□□□□□ -1.36
IFT140Q96RY7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 AC020914.6-201ENST00000594327 272 ntBASIC6.58□□□□□ -1.36
IFT140Q96RY7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 AP005264.7-201ENST00000625003 745 ntBASIC6.58□□□□□ -1.36
IFT140Q96RY7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
IFT140Q96RY7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
IFT140Q96RY7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
IFT140Q96RY7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
IFT140Q96RY7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
IFT140Q96RY7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
IFT140Q96RY7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
IFT140Q96RY7 VTI1BP4-201ENST00000427516 527 ntBASIC6.57□□□□□ -1.36
IFT140Q96RY7 AC006994.1-201ENST00000438212 839 ntBASIC6.57□□□□□ -1.36
IFT140Q96RY7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 CYCSP35-201ENST00000451978 304 ntBASIC6.57□□□□□ -1.36
IFT140Q96RY7 RAD23BP3-201ENST00000454157 1152 ntBASIC6.57□□□□□ -1.36
IFT140Q96RY7 HMGB3P16-201ENST00000508037 287 ntBASIC6.57□□□□□ -1.36
IFT140Q96RY7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 MIR6852-201ENST00000621699 66 ntBASIC6.57□□□□□ -1.36
IFT140Q96RY7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
IFT140Q96RY7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.57□□□□□ -1.36
IFT140Q96RY7 MAPK10-320ENST00000641462 6696 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
IFT140Q96RY7 Y_RNA.500-201ENST00000384466 111 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.56□□□□□ -1.36
IFT140Q96RY7 Z74696.2-201ENST00000436514 498 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 GTF3AP5-201ENST00000442645 697 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 AL136126.1-201ENST00000473603 402 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 UBE2DNL-203ENST00000474922 222 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.56□□□□□ -1.36
IFT140Q96RY7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.56□□□□□ -1.36
IFT140Q96RY7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.56□□□□□ -1.36
IFT140Q96RY7 NPM1P47-201ENST00000560843 856 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 AC006960.3-201ENST00000561845 705 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 AC011816.2-201ENST00000607089 556 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
IFT140Q96RY7 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.56□□□□□ -1.36
IFT140Q96RY7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.56□□□□□ -1.36
IFT140Q96RY7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
IFT140Q96RY7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.56□□□□□ -1.36
IFT140Q96RY7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
IFT140Q96RY7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
IFT140Q96RY7 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.55□□□□□ -1.36
IFT140Q96RY7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.55□□□□□ -1.36
IFT140Q96RY7 FABP3P2-201ENST00000453169 399 ntBASIC6.55□□□□□ -1.36
IFT140Q96RY7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.55□□□□□ -1.36
IFT140Q96RY7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.55□□□□□ -1.36
IFT140Q96RY7 MIR8057-201ENST00000620957 69 ntBASIC6.55□□□□□ -1.36
IFT140Q96RY7 AC244258.1-201ENST00000637553 1071 ntBASIC6.55□□□□□ -1.36
IFT140Q96RY7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC6.55□□□□□ -1.36
IFT140Q96RY7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.55□□□□□ -1.36
IFT140Q96RY7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
IFT140Q96RY7 AL356274.2-201ENST00000624379 3752 ntBASIC6.55□□□□□ -1.36
IFT140Q96RY7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.55□□□□□ -1.36
IFT140Q96RY7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.55□□□□□ -1.36
IFT140Q96RY7 AP001284.1-201ENST00000528393 2118 ntBASIC6.55□□□□□ -1.36
IFT140Q96RY7 MIR199A2-201ENST00000385289 110 ntBASIC6.54□□□□□ -1.36
IFT140Q96RY7 DPY19L1P2-201ENST00000426647 915 ntBASIC6.54□□□□□ -1.36
IFT140Q96RY7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.54□□□□□ -1.36
IFT140Q96RY7 AP001486.1-201ENST00000463339 476 ntBASIC6.54□□□□□ -1.36
IFT140Q96RY7 MTND6P6-201ENST00000478031 263 ntBASIC6.54□□□□□ -1.36
IFT140Q96RY7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.54□□□□□ -1.36
IFT140Q96RY7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.54□□□□□ -1.36
IFT140Q96RY7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.54□□□□□ -1.36
IFT140Q96RY7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.54□□□□□ -1.36
IFT140Q96RY7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
IFT140Q96RY7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
IFT140Q96RY7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
IFT140Q96RY7 AP002001.2-201ENST00000529025 1469 ntBASIC6.54□□□□□ -1.36
IFT140Q96RY7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
IFT140Q96RY7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
IFT140Q96RY7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
IFT140Q96RY7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 AL591503.2-201ENST00000442314 1005 ntBASIC6.53□□□□□ -1.36
IFT140Q96RY7 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 AC083837.1-201ENST00000565297 2994 ntBASIC6.53□□□□□ -1.36
IFT140Q96RY7 AC008833.1-201ENST00000611633 691 ntBASIC6.53□□□□□ -1.36
IFT140Q96RY7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
IFT140Q96RY7 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.53□□□□□ -1.36
IFT140Q96RY7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms