Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 RNU6-147P-201ENST00000383983 107 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 RNU6-332P-201ENST00000391193 108 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL589655.1-201ENST00000405398 482 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 RPL7P8-201ENST00000411964 730 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 TMEM183AP1-205ENST00000432739 290 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC073614.1-201ENST00000438690 650 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC096638.1-201ENST00000444678 216 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 RFC5P1-201ENST00000454419 874 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC015864.1-201ENST00000496512 544 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC008802.1-201ENST00000519121 791 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SAA3P-201ENST00000533267 365 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MTCO3P23-201ENST00000561363 289 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AGGF1P7-201ENST00000562369 913 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC040162.2-201ENST00000573092 157 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC022432.1-201ENST00000595739 310 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC243960.4-201ENST00000600532 288 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL139344.1-201ENST00000605228 195 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC096772.1-201ENST00000609146 564 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL627230.1-201ENST00000613077 211 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AL591926.8-201ENST00000616876 211 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC104985.3-201ENST00000623479 597 ntBASIC1.74□□□□□ -2.13
HMCN1Q96RW7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMCN1Q96RW7 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RNU6-1159P-201ENST00000362933 107 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RNA5-8SP7-201ENST00000363443 155 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 Y_RNA.466-201ENST00000384294 113 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 MIR1265-201ENST00000408444 86 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL450992.3-201ENST00000413192 568 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL356806.1-201ENST00000422524 916 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC236972.1-201ENST00000433225 199 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 POLR2KP2-201ENST00000438155 177 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL731563.1-201ENST00000442202 214 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 MTATP6P7-201ENST00000453315 681 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RPS6P2-201ENST00000454208 705 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 SNORD97-201ENST00000459187 142 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 GAPDHP39-201ENST00000481866 979 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 DCAF13P1-201ENST00000495256 1330 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL035404.1-201ENST00000497982 568 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RPS4XP20-201ENST00000505751 772 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC098799.3-201ENST00000506095 438 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 HMGB1P44-201ENST00000508597 572 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms