Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 GAPDHP25-201ENST00000447061 1001 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 ATG12P2-201ENST00000456830 416 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 RNU7-27P-201ENST00000459281 62 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 RPS3AP22-201ENST00000488297 769 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC113347.3-201ENST00000509113 148 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 MTCO3P28-201ENST00000513351 515 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 RNU5A-4P-201ENST00000516588 111 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 HMGB1P23-201ENST00000518743 568 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 MTND2P26-201ENST00000528255 1029 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AP002812.4-201ENST00000532139 286 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC027369.5-201ENST00000533838 755 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC044913.1-201ENST00000557200 430 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 NIFKP8-201ENST00000560500 874 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AL354943.1-201ENST00000572103 781 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AP001542.2-201ENST00000593141 364 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AL109653.1-201ENST00000603091 248 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AL592148.2-201ENST00000612210 372 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC084782.3-201ENST00000612282 578 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC009163.6-201ENST00000612367 342 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC131159.1-201ENST00000621854 213 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AL157770.1-201ENST00000623049 439 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC067852.7-201ENST00000623270 535 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC073869.8-201ENST00000641806 335 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC100871.1-201ENST00000507871 1456 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AP001273.1-201ENST00000624493 3152 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 MAPK10-286ENST00000641208 8747 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC093719.1-202ENST00000392735 373 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AL512430.2-201ENST00000406786 339 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 RN7SKP213-201ENST00000410746 298 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 C4BPAP1-201ENST00000415474 1893 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 RPL21P43-201ENST00000425440 472 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 USP9YP11-201ENST00000427537 717 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 GSTM5P1-201ENST00000434751 660 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC002542.1-201ENST00000440683 193 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC009263.1-201ENST00000441193 1239 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 NSRP1P1-201ENST00000444067 1693 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AL031584.1-201ENST00000447169 754 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AL133217.1-201ENST00000450980 425 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 NIP7P2-201ENST00000485801 544 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC111193.1-201ENST00000504097 155 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 OR5M14P-201ENST00000506803 618 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AP000926.4-201ENST00000527351 454 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 HMGN2P6-201ENST00000551091 273 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC092079.1-201ENST00000558620 1985 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC044860.2-201ENST00000561005 179 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC126323.6-202ENST00000568092 3511 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AL022161.1-201ENST00000604390 213 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC055764.2-201ENST00000610089 670 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AC107075.1-201ENST00000613695 314 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 RPSAP73-201ENST00000614820 330 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms