Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM54Q969K7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM54Q969K7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM54Q969K7 SNORA27.3-201ENST00000364937 134 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 RNU6-244P-201ENST00000391028 104 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 ATP5F1P2-201ENST00000398143 760 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL583835.1-201ENST00000399570 407 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 RNU6-603P-201ENST00000411403 107 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 EIF4A1P3-201ENST00000411521 244 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL161631.1-201ENST00000417933 486 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL157831.1-201ENST00000426134 473 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 DPY19L1P2-201ENST00000426647 915 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL732292.1-201ENST00000426692 226 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 EIF4A1P11-201ENST00000451239 222 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 RPL23AP81-201ENST00000455252 467 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 CCDC75P1-201ENST00000469247 791 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 HMGB3P14-201ENST00000494195 599 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 HMGB1P3-201ENST00000502802 616 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC108145.1-201ENST00000503770 153 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 RNU6-889P-201ENST00000517189 103 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 TRAV8-5-201ENST00000537369 341 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC008083.2-201ENST00000546707 476 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 CR383656.6-201ENST00000550518 394 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC023158.1-201ENST00000561632 1025 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC068790.4-201ENST00000602474 263 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC008745.1-201ENST00000604064 271 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL049844.2-201ENST00000604280 628 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 BX322635.1-201ENST00000605804 496 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 MIR6820-201ENST00000611508 62 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL158196.1-201ENST00000616786 434 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM54Q969K7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TMEM54Q969K7 AC010300.1-201ENST00000600671 5134 ntBASIC3.8□□□□□ -1.8
TMEM54Q969K7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC090971.4-201ENST00000560291 1800 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 OR10J6P-201ENST00000289731 930 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 RNU1-108P-201ENST00000362556 161 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC019155.1-201ENST00000382242 574 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC114878.1-201ENST00000441166 358 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 CYCSP42-201ENST00000450823 238 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC005229.2-201ENST00000456995 399 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 RN7SL459P-201ENST00000481078 302 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC005912.1-201ENST00000495392 255 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 PPBPP1-201ENST00000510807 373 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 RNA5SP73-201ENST00000516744 108 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 NPM1P6-201ENST00000521088 871 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 NPM1P47-201ENST00000560843 856 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC124068.1-201ENST00000563131 678 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AC008013.2-202ENST00000637965 364 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM54Q969K7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TMEM54Q969K7 AL451142.2-201ENST00000429076 2090 ntBASIC3.79□□□□□ -1.8
TMEM54Q969K7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms