Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC008629.2-201ENST00000503783 483 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 SRP72-202ENST00000504757 745 ntTSL 2 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 RNA5SP400-201ENST00000517155 111 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AC239860.2-201ENST00000525886 270 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AC025678.1-201ENST00000567861 338 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AL035413.2-201ENST00000604801 525 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 AC108479.2-201ENST00000617314 601 ntBASIC10.38□□□□□ -0.75
TRIM41Q8WV44 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC10.38□□□□□ -0.75
TRIM41Q8WV44 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AL137918.1-201ENST00000624542 1922 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 NAP1L4P1-201ENST00000319092 1157 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 RNU6-254P-201ENST00000363377 107 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AC068138.1-201ENST00000412635 217 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AC245096.1-201ENST00000413104 546 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 FTLP8-201ENST00000446770 267 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 SNRPGP6-201ENST00000451124 220 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 FAM172BP-201ENST00000487497 1089 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 RAB9BP1-201ENST00000519581 626 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AC083923.1-201ENST00000523708 376 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 MIR4480-201ENST00000582492 71 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 MIR6793-201ENST00000612376 63 ntBASIC10.37□□□□□ -0.75
TRIM41Q8WV44 IARS-213ENST00000627121 4587 ntTSL 5 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TRIM41Q8WV44 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AL139805.2-201ENST00000455305 2433 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC008957.3-201ENST00000624112 2242 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 RNA5SP500-201ENST00000364486 119 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 MIR223-201ENST00000385204 110 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AP000357.1-201ENST00000409926 1165 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AMD1P2-201ENST00000412936 992 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 FCF1P1-201ENST00000432690 571 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 CYCSP51-201ENST00000443545 318 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AL022237.1-201ENST00000446663 358 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 ARPC3P5-201ENST00000448802 534 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 MTCO3P20-201ENST00000454926 688 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC021660.1-201ENST00000465006 554 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 FGF7P4-201ENST00000509595 295 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 SCARNA18.1-201ENST00000516330 83 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 RN7SKP31-201ENST00000516354 278 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AP005119.1-201ENST00000580956 292 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC091193.1-201ENST00000604640 448 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 AC141002.1-201ENST00000607025 279 ntBASIC10.36□□□□□ -0.75
TRIM41Q8WV44 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
TRIM41Q8WV44 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TRIM41Q8WV44 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms