Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 NOP56P3-201ENST00000549457 385 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 AC063949.1-201ENST00000552900 865 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 AC009097.3-201ENST00000563557 1018 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 AC124283.4-201ENST00000581815 456 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 AC069061.3-201ENST00000582254 823 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 AC069304.3-201ENST00000603938 1084 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 AC021755.4-201ENST00000616620 456 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 Z98755.1-201ENST00000407015 1384 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
LMO3Q8TAP4 OR56B2P-202ENST00000641377 2453 ntBASIC4.78□□□□□ -1.64
LMO3Q8TAP4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 RNU6-697P-201ENST00000363348 107 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 RNU6-1331P-201ENST00000363658 106 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 MIR3065-201ENST00000390137 79 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 RANP4-201ENST00000413361 655 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 KRR1P1-201ENST00000419430 803 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 FO393414.1-201ENST00000428697 1184 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 SKP1P3-201ENST00000429280 487 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 RPL23AP25-201ENST00000430973 463 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 RPS6P15-201ENST00000431996 751 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC114495.1-201ENST00000441274 436 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC093770.1-201ENST00000511559 571 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC091163.3-201ENST00000518269 1144 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC100770.1-201ENST00000532310 322 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC068831.4-201ENST00000556118 109 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 MTND3P13-201ENST00000574391 343 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AP005119.2-201ENST00000579735 1105 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC005034.4-201ENST00000603612 899 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC113368.1-201ENST00000603736 382 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC079880.2-201ENST00000603790 1213 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AL049844.2-201ENST00000604280 628 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC018690.1-201ENST00000608144 626 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AL512506.2-201ENST00000624472 458 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 FRG1DP-201ENST00000635586 771 ntBASIC4.77□□□□□ -1.65
LMO3Q8TAP4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO3Q8TAP4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.76□□□□□ -1.65
LMO3Q8TAP4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.76□□□□□ -1.65
LMO3Q8TAP4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 AC008033.1-201ENST00000216407 1162 ntBASIC4.76□□□□□ -1.65
LMO3Q8TAP4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO3Q8TAP4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms