Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-43P-201ENST00000384302 107 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 MT-TG-201ENST00000387429 68 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 RPL5P18-201ENST00000406671 891 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC007394.1-201ENST00000421941 531 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 MTCO3P46-201ENST00000425787 232 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 GTF2IP13-201ENST00000438487 386 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 MTND6P13-201ENST00000443510 523 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 NDUFA5P7-201ENST00000452914 242 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 C1DP4-201ENST00000455429 424 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 SNORD19B-201ENST00000459623 84 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AF213884.1-201ENST00000488102 463 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 RPL7P38-201ENST00000488396 739 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 HMGN2P36-201ENST00000529541 409 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 OR5BN1P-201ENST00000532955 829 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC011840.5-201ENST00000582125 771 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AL596327.1-201ENST00000603629 213 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC090948.1-201ENST00000607464 549 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC018690.1-201ENST00000608144 626 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC011815.3-201ENST00000624194 473 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 RLIMP2-201ENST00000427891 1563 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC117409.1-201ENST00000470499 1310 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC010132.2-201ENST00000295493 1043 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ENSAP3-201ENST00000312710 333 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 RNU6-1263P-201ENST00000384601 106 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 MIR525-201ENST00000384978 85 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ATP5HP3-201ENST00000396994 486 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 PEX12P1-201ENST00000400284 1048 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 HMGB1P20-201ENST00000402555 677 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 TXNP7-201ENST00000406296 293 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 RN7SKP29-201ENST00000410957 272 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 Z82205.1-201ENST00000428456 297 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 MTND2P29-201ENST00000438595 412 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC023274.2-201ENST00000445264 521 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 RPS17P15-201ENST00000475609 349 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 RPL36AP51-201ENST00000487216 318 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 COX6B1P2-201ENST00000489624 230 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC083795.1-201ENST00000491760 320 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC108693.1-201ENST00000496068 432 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC026801.2-201ENST00000515352 425 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 FAM27E4-201ENST00000605259 342 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC024255.1-201ENST00000614376 102 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 RN7SL544P-201ENST00000617232 284 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC068831.8-201ENST00000620171 435 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 RN7SL763P-201ENST00000620922 284 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC018445.2-201ENST00000622987 260 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 AC006840.1-201ENST00000623069 542 ntBASIC7.69□□□□□ -1.18
RC3H1Q5TC82 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms