Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 AC104651.1-201ENST00000427559 735 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 ATP5F1P1-201ENST00000433775 569 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 AC234064.1-201ENST00000436312 247 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC241584.1-201ENST00000438469 1241 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXF2Q12947 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 WASF1P1-201ENST00000447560 1131 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 SBDSP1-204ENST00000453858 737 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXF2Q12947 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXF2Q12947 AC091959.2-201ENST00000477363 321 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 RN7SL826P-201ENST00000479724 288 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC004453.1-201ENST00000487895 408 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 RPL37P25-201ENST00000507308 276 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC108120.2-201ENST00000512973 294 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 AC106038.2-201ENST00000520706 568 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 NPM1P6-201ENST00000521088 871 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 HMGN2P6-201ENST00000551091 273 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXF2Q12947 AC084757.1-201ENST00000559987 490 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 ROCK1P1-201ENST00000573767 549 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXF2Q12947 SNORA59B-202ENST00000578183 701 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXF2Q12947 AL137072.1-201ENST00000603444 466 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC091805.2-201ENST00000603848 235 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXF2Q12947 AC091946.2-201ENST00000606105 291 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC004067.1-201ENST00000608733 700 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AL159169.2-201ENST00000610061 1269 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC118658.2-201ENST00000618697 459 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC022509.4-201ENST00000621404 572 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXF2Q12947 OR5AK4P-201ENST00000635912 903 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 AC074101.1-201ENST00000637861 241 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 MFSD8-245ENST00000641743 948 ntBASIC4.78□□□□□ -1.64
FOXF2Q12947 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
FOXF2Q12947 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXF2Q12947 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXF2Q12947 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXF2Q12947 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
FOXF2Q12947 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXF2Q12947 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXF2Q12947 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXF2Q12947 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXF2Q12947 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXF2Q12947 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXF2Q12947 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
FOXF2Q12947 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXF2Q12947 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
FOXF2Q12947 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 AL391994.1-201ENST00000254724 282 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 OR4G2P-201ENST00000328113 903 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXF2Q12947 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 RNU6-543P-201ENST00000362576 108 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 RNU6-560P-201ENST00000364007 108 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 RNU6-707P-201ENST00000364647 95 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 Y_RNA.390-201ENST00000383932 102 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 RNU1-106P-201ENST00000384382 164 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 RNU11-201ENST00000387069 134 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 MIR765-201ENST00000390226 114 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 AL645927.1-201ENST00000396783 406 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 RNU2-66P-201ENST00000410650 161 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXF2Q12947 RPL7P8-201ENST00000411964 730 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.77□□□□□ -1.65
FOXF2Q12947 CEACAMP8-201ENST00000413902 580 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXF2Q12947 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXF2Q12947 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXF2Q12947 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXF2Q12947 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXF2Q12947 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXF2Q12947 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXF2Q12947 AL590103.1-201ENST00000434488 307 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 CLUHP1-201ENST00000435012 1190 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXF2Q12947 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXF2Q12947 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXF2Q12947 RPS26P30-201ENST00000443431 335 ntBASIC4.77□□□□□ -1.65
FOXF2Q12947 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXF2Q12947 USP9YP29-201ENST00000445112 563 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms