Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDH1Q08174 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC105749.1-201ENST00000631338 2008 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH1Q08174 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
PCDH1Q08174 SMG1P5-202ENST00000529428 4219 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 SMG1P2-201ENST00000566127 4221 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 AC025574.1-201ENST00000554784 1653 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 AC006511.3-201ENST00000624929 1783 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 OR52B1P-201ENST00000316506 909 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 SNORD16-201ENST00000362803 99 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 RNU6-451P-201ENST00000362921 107 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 SNORD81.2-201ENST00000365153 76 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 RNU6-282P-201ENST00000365357 103 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 SNORD94-201ENST00000386037 137 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 ARSFP1-201ENST00000398758 477 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 OR2W4P-201ENST00000406496 926 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDH1Q08174 RNA5SP155-201ENST00000411154 129 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 RNA5SP115-201ENST00000411160 107 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 PDCL2P1-201ENST00000419302 352 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AC007568.1-201ENST00000422912 471 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PCDH1Q08174 EIF1P3-201ENST00000423841 334 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AL022324.2-201ENST00000434827 780 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AL356121.1-201ENST00000442911 156 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AL034369.1-201ENST00000453808 477 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AC096741.1-201ENST00000472250 846 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 FAM172BP-201ENST00000487497 1089 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AC109481.1-201ENST00000509173 282 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 IGHV4-55-201ENST00000520889 368 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 BRD9P1-201ENST00000529855 560 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH1Q08174 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AC078814.3-201ENST00000553036 491 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDH1Q08174 TPRX1P1-201ENST00000557620 319 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AC068790.5-201ENST00000602741 355 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 MIR98-201ENST00000606724 119 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AL008723.3-201ENST00000608926 449 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AC068722.2-201ENST00000618734 544 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 AC002550.2-201ENST00000621246 394 ntBASIC6.17□□□□□ -1.42
PCDH1Q08174 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH1Q08174 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH1Q08174 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDH1Q08174 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDH1Q08174 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
PCDH1Q08174 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC024560.2-201ENST00000507981 1497 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDH1Q08174 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PCDH1Q08174 CCT4P2-201ENST00000233836 1548 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 SNORD35A-201ENST00000363389 86 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 Y_RNA.159-201ENST00000363674 87 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 RNA5SP478-201ENST00000364657 115 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AL356432.1-201ENST00000405809 419 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 RN7SKP281-201ENST00000410472 352 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 HMGA1P8-201ENST00000414130 321 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH1Q08174 RPL21P50-201ENST00000417698 477 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms