Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL451142.2-201ENST00000429076 2090 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 RNA5SP443-201ENST00000363083 132 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 SNORD74.4-201ENST00000364129 80 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS1Q01581 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 RPL18P10-201ENST00000425606 538 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 RPL23AP4-201ENST00000427757 463 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 RPS3AP54-201ENST00000435535 734 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC069277.2-201ENST00000454211 432 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC010469.1-201ENST00000463864 576 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS1Q01581 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 RN7SL691P-201ENST00000494487 301 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC025674.1-201ENST00000507074 324 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 RNU6-751P-201ENST00000516382 101 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 RNA5SP73-201ENST00000516744 108 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AL049874.4-201ENST00000557593 255 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 MIR4284-201ENST00000578924 81 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 SNX6P1-201ENST00000601728 1224 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC090948.2-201ENST00000607363 564 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS1Q01581 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC009237.17-201ENST00000618111 748 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 MIR7702-201ENST00000621931 59 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS1Q01581 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS1Q01581 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AC074029.4-201ENST00000624796 1859 ntBASIC4.03□□□□□ -1.77
HMGCS1Q01581 AP000756.2-201ENST00000624168 2567 ntBASIC4.03□□□□□ -1.77
HMGCS1Q01581 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.03□□□□□ -1.77
HMGCS1Q01581 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC007390.2-201ENST00000606229 3803 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 RNU6-386P-201ENST00000362650 107 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 RNU4-23P-201ENST00000362839 140 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC016397.1-201ENST00000412463 242 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 RPL6P29-201ENST00000414863 865 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC004690.1-201ENST00000418216 328 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC023141.6-201ENST00000429418 337 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 RPS29P17-201ENST00000430795 166 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 ELOCP8-201ENST00000439309 332 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 ELOCP15-201ENST00000442090 332 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 EIF2S2P2-201ENST00000447161 982 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 EIF4A1P11-201ENST00000451239 222 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 RAD23BP3-201ENST00000454157 1152 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 RNU6-775P-201ENST00000459318 96 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 HMGN1P8-201ENST00000463578 288 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC011276.1-201ENST00000469688 323 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AF213884.1-201ENST00000488102 463 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 OR52A4P-203ENST00000498233 1014 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AL592156.1-201ENST00000508758 304 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC095038.2-201ENST00000621464 1070 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC015722.2-201ENST00000622210 551 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AL139254.3-201ENST00000641097 674 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 530.1 ms