Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IRF9Q00978 AK4P4-201ENST00000419465 646 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 LINC00993-201ENST00000420453 540 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC092647.1-201ENST00000420654 287 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.55□□□□□ -1.52
IRF9Q00978 AC115283.1-201ENST00000427353 400 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 RPS26P40-201ENST00000435209 294 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 UBE2V1P3-201ENST00000439651 417 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.55□□□□□ -1.52
IRF9Q00978 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 SLC31A1P1-201ENST00000451221 567 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 NXT1P1-201ENST00000458481 316 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 AP002884.1-201ENST00000479691 655 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 ATP5LP5-201ENST00000483050 299 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC005912.1-201ENST00000495392 255 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.55□□□□□ -1.52
IRF9Q00978 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.55□□□□□ -1.52
IRF9Q00978 OR5G4P-201ENST00000525251 760 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 PMS2P3-207ENST00000529061 717 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC087276.1-201ENST00000529659 480 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 TRIM51DP-201ENST00000529746 596 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
IRF9Q00978 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 AC006512.2-201ENST00000543250 486 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.55□□□□□ -1.52
IRF9Q00978 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.55□□□□□ -1.52
IRF9Q00978 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 AC002310.3-201ENST00000569728 723 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC067773.1-201ENST00000603284 1094 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC091805.2-201ENST00000603848 235 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC009027.1-201ENST00000604510 479 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AL139124.1-201ENST00000609123 421 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC068944.2-201ENST00000610373 403 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 U6atac.1-201ENST00000616025 117 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IRF9Q00978 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IRF9Q00978 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IRF9Q00978 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
IRF9Q00978 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IRF9Q00978 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IRF9Q00978 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
IRF9Q00978 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
IRF9Q00978 HSPA8P17-201ENST00000427029 1382 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 AC079097.1-201ENST00000512187 1399 ntBASIC5.55□□□□□ -1.52
IRF9Q00978 SMG1P7-201ENST00000565246 2704 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
IRF9Q00978 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 SAMMSON-210ENST00000641260 1308 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.54□□□□□ -1.52
IRF9Q00978 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.54□□□□□ -1.52
IRF9Q00978 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.54□□□□□ -1.52
IRF9Q00978 OR10J6P-201ENST00000289731 930 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 Y_RNA.41-201ENST00000362646 102 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.54□□□□□ -1.52
IRF9Q00978 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.54□□□□□ -1.52
IRF9Q00978 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
IRF9Q00978 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.54□□□□□ -1.52
IRF9Q00978 RPL21P108-201ENST00000413857 481 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.54□□□□□ -1.52
IRF9Q00978 RBMY2KP-201ENST00000418221 992 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 RNF10P1-201ENST00000418589 369 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 UBTFL3-201ENST00000418934 1024 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.54□□□□□ -1.52
IRF9Q00978 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.54□□□□□ -1.52
IRF9Q00978 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.54□□□□□ -1.52
IRF9Q00978 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.54□□□□□ -1.52
IRF9Q00978 AZGP1P2-201ENST00000454506 345 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IRF9Q00978 UBFD1P1-201ENST00000473259 814 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 RPS17P15-201ENST00000475609 349 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 UBTFL6-201ENST00000477929 1024 ntBASIC5.54□□□□□ -1.52
IRF9Q00978 RPL21P6-201ENST00000479171 504 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms