Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RPL12P3-201ENST00000440080 396 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM3P62310 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
LSM3P62310 AC104109.1-201ENST00000498563 436 ntBASIC3.47□□□□□ -1.85
LSM3P62310 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM3P62310 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM3P62310 RN7SKP70-201ENST00000516655 271 ntBASIC3.47□□□□□ -1.85
LSM3P62310 RN7SKP5-201ENST00000517045 272 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM3P62310 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.47□□□□□ -1.85
LSM3P62310 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 SUMO2P20-201ENST00000520803 283 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM3P62310 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.47□□□□□ -1.85
LSM3P62310 AP001804.2-201ENST00000533932 910 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC135001.1-201ENST00000544546 283 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC084783.1-201ENST00000565846 910 ntBASIC3.47□□□□□ -1.85
LSM3P62310 MIR4425-201ENST00000580572 84 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM3P62310 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM3P62310 AC115286.1-201ENST00000604298 434 ntBASIC3.47□□□□□ -1.85
LSM3P62310 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM3P62310 RMST_8.1-201ENST00000610287 165 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC012409.3-201ENST00000611343 981 ntBASIC3.47□□□□□ -1.85
LSM3P62310 FAM27D1-201ENST00000612308 341 ntBASIC3.47□□□□□ -1.85
LSM3P62310 AC244100.4-201ENST00000617747 388 ntBASIC3.47□□□□□ -1.85
LSM3P62310 MIR6778-201ENST00000617912 73 ntBASIC3.47□□□□□ -1.85
LSM3P62310 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.47□□□□□ -1.85
LSM3P62310 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LSM3P62310 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
LSM3P62310 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LSM3P62310 AC093535.2-201ENST00000624769 2326 ntBASIC3.47□□□□□ -1.85
LSM3P62310 NAMPTP1-201ENST00000440465 2514 ntBASIC3.46□□□□□ -1.85
LSM3P62310 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
LSM3P62310 ASNSP1-204ENST00000641977 1664 ntBASIC3.46□□□□□ -1.85
LSM3P62310 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LSM3P62310 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.46□□□□□ -1.86
LSM3P62310 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
LSM3P62310 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.46□□□□□ -1.86
LSM3P62310 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.46□□□□□ -1.86
LSM3P62310 AL590704.1-201ENST00000402856 794 ntBASIC3.46□□□□□ -1.86
LSM3P62310 RN7SKP213-201ENST00000410746 298 ntBASIC3.46□□□□□ -1.86
LSM3P62310 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.46□□□□□ -1.86
LSM3P62310 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.46□□□□□ -1.86
LSM3P62310 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.46□□□□□ -1.86
LSM3P62310 AC008072.1-201ENST00000434254 824 ntBASIC3.46□□□□□ -1.86
LSM3P62310 AL359265.2-201ENST00000434367 631 ntBASIC3.46□□□□□ -1.86
LSM3P62310 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.46□□□□□ -1.86
LSM3P62310 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.46□□□□□ -1.86
LSM3P62310 FCF1P7-201ENST00000451185 558 ntBASIC3.46□□□□□ -1.86
LSM3P62310 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.46□□□□□ -1.86
LSM3P62310 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LSM3P62310 AC092691.2-201ENST00000461787 803 ntBASIC3.46□□□□□ -1.86
LSM3P62310 RPL7P1-201ENST00000468161 747 ntBASIC3.46□□□□□ -1.86
LSM3P62310 RPL7P9-201ENST00000468715 747 ntBASIC3.46□□□□□ -1.86
LSM3P62310 RN7SL741P-201ENST00000482473 289 ntBASIC3.46□□□□□ -1.86
LSM3P62310 AK6-203ENST00000502819 743 ntTSL 5 BASIC3.46□□□□□ -1.86
LSM3P62310 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.46□□□□□ -1.86
LSM3P62310 AC106806.2-201ENST00000509365 500 ntBASIC3.46□□□□□ -1.86
LSM3P62310 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.46□□□□□ -1.86
LSM3P62310 RN7SKP209-201ENST00000516888 304 ntBASIC3.46□□□□□ -1.86
LSM3P62310 TRAV8-5-201ENST00000537369 341 ntBASIC3.46□□□□□ -1.86
LSM3P62310 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.46□□□□□ -1.86
LSM3P62310 AC008126.1-201ENST00000549019 480 ntBASIC3.46□□□□□ -1.86
LSM3P62310 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.46□□□□□ -1.86
LSM3P62310 MIR4737-201ENST00000583979 81 ntBASIC3.46□□□□□ -1.86
LSM3P62310 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.46□□□□□ -1.86
LSM3P62310 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.46□□□□□ -1.86
LSM3P62310 OR5AC4P-202ENST00000642086 985 ntBASIC3.46□□□□□ -1.86
LSM3P62310 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LSM3P62310 PNPT1P2-201ENST00000456768 2050 ntBASIC3.46□□□□□ -1.86
LSM3P62310 AC100871.1-201ENST00000507871 1456 ntBASIC3.46□□□□□ -1.86
LSM3P62310 AC095050.2-201ENST00000510748 1458 ntBASIC3.46□□□□□ -1.86
LSM3P62310 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
LSM3P62310 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.46□□□□□ -1.86
LSM3P62310 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LSM3P62310 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LSM3P62310 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LSM3P62310 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
LSM3P62310 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LSM3P62310 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
LSM3P62310 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LSM3P62310 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LSM3P62310 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LSM3P62310 AC011155.1-201ENST00000316512 456 ntBASIC3.45□□□□□ -1.86
LSM3P62310 RPL23AP59-201ENST00000399415 461 ntBASIC3.45□□□□□ -1.86
LSM3P62310 HMGB3P19-201ENST00000403971 560 ntBASIC3.45□□□□□ -1.86
LSM3P62310 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.45□□□□□ -1.86
LSM3P62310 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LSM3P62310 RPL24P2-201ENST00000421023 475 ntBASIC3.45□□□□□ -1.86
LSM3P62310 HIGD1AP4-201ENST00000430194 280 ntBASIC3.45□□□□□ -1.86
LSM3P62310 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.45□□□□□ -1.86
LSM3P62310 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.45□□□□□ -1.86
LSM3P62310 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.45□□□□□ -1.86
LSM3P62310 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.45□□□□□ -1.86
LSM3P62310 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.45□□□□□ -1.86
LSM3P62310 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.45□□□□□ -1.86
LSM3P62310 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms