Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RN7SKP221-201ENST00000410420 301 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 RN7SKP271-201ENST00000410528 320 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 RNU2-62P-201ENST00000410868 191 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 RNU2-18P-201ENST00000411224 162 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 DUTP6-201ENST00000425573 462 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 RPL23AP30-201ENST00000432419 501 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 LYPLA1P1-201ENST00000434514 622 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
EPHA4P54764 AL445466.1-201ENST00000448432 357 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 CACYBPP2-201ENST00000453625 678 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.53□□□□□ -1.36
EPHA4P54764 AC093166.4-201ENST00000457867 318 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AC098818.1-201ENST00000478593 252 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 RN7SL382P-201ENST00000482631 282 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AL163973.1-201ENST00000484753 577 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.53□□□□□ -1.36
EPHA4P54764 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 PSMA2P1-201ENST00000526365 646 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 ZNF705CP-201ENST00000530515 889 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 HMGB1P42-201ENST00000532126 553 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 ELOCP31-201ENST00000540463 467 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.53□□□□□ -1.36
EPHA4P54764 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.53□□□□□ -1.36
EPHA4P54764 NCAPGP2-201ENST00000557911 754 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.53□□□□□ -1.36
EPHA4P54764 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.53□□□□□ -1.36
EPHA4P54764 MIR3668-201ENST00000582138 75 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 RPL29P33-201ENST00000587474 316 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 AP001330.4-201ENST00000604350 154 ntBASIC6.53□□□□□ -1.36
EPHA4P54764 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.53□□□□□ -1.36
EPHA4P54764 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
EPHA4P54764 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
EPHA4P54764 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.53□□□□□ -1.36
EPHA4P54764 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
EPHA4P54764 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.53□□□□□ -1.36
EPHA4P54764 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
EPHA4P54764 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
EPHA4P54764 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
EPHA4P54764 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
EPHA4P54764 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
EPHA4P54764 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
EPHA4P54764 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
EPHA4P54764 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHA4P54764 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHA4P54764 AC092447.10-201ENST00000620607 1652 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHA4P54764 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHA4P54764 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
EPHA4P54764 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHA4P54764 Y_RNA.100-201ENST00000363141 102 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 RNU1-24P-201ENST00000364285 165 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 RNA5SP140-201ENST00000364524 92 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
EPHA4P54764 RNU6-463P-201ENST00000384340 107 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
EPHA4P54764 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.52□□□□□ -1.37
EPHA4P54764 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHA4P54764 NDUFB4P5-201ENST00000415445 361 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 RPS15AP12-201ENST00000419498 388 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 AC048351.1-201ENST00000420064 602 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 AL451054.2-201ENST00000420896 202 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 AC018630.2-202ENST00000422992 927 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHA4P54764 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHA4P54764 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHA4P54764 HSPE1P28-201ENST00000443139 211 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 AC245291.3-201ENST00000443400 292 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHA4P54764 Y_RNA.639-201ENST00000458981 102 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.52□□□□□ -1.37
EPHA4P54764 AL117692.1-201ENST00000494283 713 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 RN7SL649P-201ENST00000496974 275 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 SUMO2P4-201ENST00000504193 276 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 AC110792.2-201ENST00000510278 224 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 IGLVIV-64-201ENST00000518581 301 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHA4P54764 AC090572.1-201ENST00000519251 160 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 SUB1P1-201ENST00000524415 382 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.52□□□□□ -1.37
EPHA4P54764 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.52□□□□□ -1.37
EPHA4P54764 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.52□□□□□ -1.37
EPHA4P54764 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 LSM6P2-201ENST00000552208 177 ntBASIC6.52□□□□□ -1.37
EPHA4P54764 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.52□□□□□ -1.37
EPHA4P54764 AL356432.3-201ENST00000568952 465 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms