Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK2P53671 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.5□□□□□ -1.69
LIMK2P53671 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LIMK2P53671 AC021146.4-201ENST00000309229 279 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 RNU1-108P-201ENST00000362556 161 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 SNORA68.2-201ENST00000391263 128 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AL356967.1-201ENST00000406305 431 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 SNORA74C-2-201ENST00000411179 201 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK2P53671 AC004690.1-201ENST00000418216 328 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AL592293.2-201ENST00000422292 996 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 RPL12P34-201ENST00000424532 479 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AL732292.1-201ENST00000426692 226 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC073143.1-201ENST00000436316 395 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK2P53671 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.5□□□□□ -1.69
LIMK2P53671 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 DDX39BP2-208ENST00000453923 258 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 CABYRP1-201ENST00000465493 1045 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 RPS26P28-201ENST00000470806 348 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC068587.1-201ENST00000483613 781 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 NIP7P2-201ENST00000485801 544 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK2P53671 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK2P53671 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK2P53671 OR8K2P-201ENST00000524645 927 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AP001781.1-201ENST00000530977 207 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.5□□□□□ -1.69
LIMK2P53671 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK2P53671 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 AC027176.2-201ENST00000559166 746 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC005242.1-201ENST00000585658 438 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 AC015849.2-201ENST00000605738 409 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.5□□□□□ -1.69
LIMK2P53671 AC016542.1-201ENST00000608259 493 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AL121873.1-201ENST00000616013 524 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC016717.3-201ENST00000624730 554 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AP001002.2-201ENST00000625137 386 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK2P53671 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.5□□□□□ -1.69
LIMK2P53671 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK2P53671 AL445437.1-201ENST00000623157 3087 ntBASIC4.5□□□□□ -1.69
LIMK2P53671 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK2P53671 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK2P53671 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
LIMK2P53671 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
LIMK2P53671 BX005019.1-201ENST00000561881 1810 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
LIMK2P53671 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LIMK2P53671 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 RNA5SP307-201ENST00000362863 116 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 RNU6-532P-201ENST00000384318 107 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 SDHCP2-201ENST00000398565 501 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 RN7SKP222-201ENST00000410651 315 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AC073464.3-201ENST00000422564 712 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 CHIAP3-201ENST00000423668 1133 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AL390879.2-203ENST00000426943 1121 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK2P53671 AC023141.6-201ENST00000429418 337 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.49□□□□□ -1.69
LIMK2P53671 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK2P53671 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.49□□□□□ -1.69
LIMK2P53671 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK2P53671 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.49□□□□□ -1.69
LIMK2P53671 AC243772.1-201ENST00000451620 410 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK2P53671 IGBP1P5-201ENST00000507524 1000 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 SETP12-201ENST00000514068 805 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AC112206.4-201ENST00000515142 405 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK2P53671 IGLV3-26-201ENST00000520756 302 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AC107918.3-201ENST00000533272 382 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.49□□□□□ -1.69
LIMK2P53671 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.49□□□□□ -1.69
LIMK2P53671 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.49□□□□□ -1.69
LIMK2P53671 RPL23AP97-201ENST00000568955 471 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 MTND6P33-201ENST00000571794 183 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK2P53671 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK2P53671 AC008782.1-201ENST00000603386 430 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 AL138721.1-201ENST00000616756 179 ntBASIC4.49□□□□□ -1.69
LIMK2P53671 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.49□□□□□ -1.69
LIMK2P53671 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.49□□□□□ -1.69
LIMK2P53671 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.49□□□□□ -1.69
LIMK2P53671 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK2P53671 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms