Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.27□□□□□ -1.57
COPB1P53618 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.27□□□□□ -1.57
COPB1P53618 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COPB1P53618 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COPB1P53618 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.26□□□□□ -1.57
COPB1P53618 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COPB1P53618 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COPB1P53618 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COPB1P53618 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.26□□□□□ -1.57
COPB1P53618 MTCO1P18-201ENST00000455518 1419 ntBASIC5.26□□□□□ -1.57
COPB1P53618 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
COPB1P53618 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 MTCO1P56-201ENST00000401674 224 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AL080315.1-201ENST00000406055 466 ntBASIC5.26□□□□□ -1.57
COPB1P53618 LINC01347-201ENST00000417964 355 ntBASIC5.26□□□□□ -1.57
COPB1P53618 RPS17P8-201ENST00000434525 335 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.26□□□□□ -1.57
COPB1P53618 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.26□□□□□ -1.57
COPB1P53618 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.26□□□□□ -1.57
COPB1P53618 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 AC244505.3-201ENST00000454598 187 ntBASIC5.26□□□□□ -1.57
COPB1P53618 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.26□□□□□ -1.57
COPB1P53618 HSPE1P22-201ENST00000456856 327 ntBASIC5.26□□□□□ -1.57
COPB1P53618 RPS18P6-201ENST00000476880 458 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AC004453.1-201ENST00000487895 408 ntBASIC5.26□□□□□ -1.57
COPB1P53618 RPS4XP18-201ENST00000495480 763 ntBASIC5.26□□□□□ -1.57
COPB1P53618 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.26□□□□□ -1.57
COPB1P53618 RNU6-1308P-201ENST00000516817 103 ntBASIC5.26□□□□□ -1.57
COPB1P53618 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.26□□□□□ -1.57
COPB1P53618 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.26□□□□□ -1.57
COPB1P53618 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.26□□□□□ -1.57
COPB1P53618 AP000859.1-201ENST00000525536 307 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.26□□□□□ -1.57
COPB1P53618 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 AP005262.1-201ENST00000582646 997 ntBASIC5.26□□□□□ -1.57
COPB1P53618 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.26□□□□□ -1.57
COPB1P53618 Z94722.1-201ENST00000604328 474 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AC018618.2-201ENST00000604770 446 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AL121932.1-201ENST00000605542 214 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AC009163.6-201ENST00000612367 342 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.26□□□□□ -1.57
COPB1P53618 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 AC068870.2-201ENST00000620635 389 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AP002782.1-201ENST00000623107 614 ntBASIC5.26□□□□□ -1.57
COPB1P53618 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.26□□□□□ -1.57
COPB1P53618 TTC39DP-201ENST00000416781 1688 ntBASIC5.26□□□□□ -1.57
COPB1P53618 AC245100.2-201ENST00000454544 1679 ntBASIC5.26□□□□□ -1.57
COPB1P53618 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
COPB1P53618 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COPB1P53618 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.26□□□□□ -1.57
COPB1P53618 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COPB1P53618 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COPB1P53618 ZNF876P-202ENST00000398732 1485 ntBASIC5.26□□□□□ -1.57
COPB1P53618 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COPB1P53618 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COPB1P53618 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COPB1P53618 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COPB1P53618 MTND5P23-201ENST00000430812 1655 ntBASIC5.25□□□□□ -1.57
COPB1P53618 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
COPB1P53618 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COPB1P53618 ANKRD36P1-201ENST00000344424 659 ntBASIC5.25□□□□□ -1.57
COPB1P53618 RNU4-92P-201ENST00000363783 136 ntBASIC5.25□□□□□ -1.57
COPB1P53618 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.25□□□□□ -1.57
COPB1P53618 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.25□□□□□ -1.57
COPB1P53618 Z97832.1-201ENST00000402490 328 ntBASIC5.25□□□□□ -1.57
COPB1P53618 HMGB1P13-201ENST00000406019 642 ntBASIC5.25□□□□□ -1.57
COPB1P53618 RPL37P18-201ENST00000411602 243 ntBASIC5.25□□□□□ -1.57
COPB1P53618 GJA6P-201ENST00000415117 1042 ntBASIC5.25□□□□□ -1.57
COPB1P53618 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.25□□□□□ -1.57
COPB1P53618 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.25□□□□□ -1.57
COPB1P53618 AL590806.1-201ENST00000415818 853 ntBASIC5.25□□□□□ -1.57
COPB1P53618 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.25□□□□□ -1.57
COPB1P53618 AL356320.2-201ENST00000417263 507 ntBASIC5.25□□□□□ -1.57
COPB1P53618 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 OR6C64P-201ENST00000419708 825 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AL645608.4-201ENST00000423619 154 ntBASIC5.25□□□□□ -1.57
COPB1P53618 HSPE1P16-201ENST00000426640 348 ntBASIC5.25□□□□□ -1.57
COPB1P53618 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.25□□□□□ -1.57
COPB1P53618 NANOGP2-201ENST00000435391 727 ntBASIC5.25□□□□□ -1.57
COPB1P53618 RPL12P3-201ENST00000440080 396 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.25□□□□□ -1.57
COPB1P53618 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.25□□□□□ -1.57
COPB1P53618 AL050341.1-201ENST00000447743 313 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.25□□□□□ -1.57
COPB1P53618 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 RPL5P22-201ENST00000480199 884 ntBASIC5.25□□□□□ -1.57
COPB1P53618 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms