Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.06□□□□□ -1.76
GTF2A1P52655 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.05□□□□□ -1.76
GTF2A1P52655 AC135352.1-201ENST00000506173 1418 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GTF2A1P52655 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
GTF2A1P52655 MIR223-201ENST00000385204 110 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.05□□□□□ -1.76
GTF2A1P52655 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.05□□□□□ -1.76
GTF2A1P52655 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.05□□□□□ -1.76
GTF2A1P52655 AL161631.1-201ENST00000417933 486 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.05□□□□□ -1.76
GTF2A1P52655 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.05□□□□□ -1.76
GTF2A1P52655 AC098799.3-201ENST00000506095 438 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 AC010265.1-201ENST00000513509 211 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 OR5D17P-201ENST00000531492 978 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 AC004825.1-201ENST00000555068 586 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
GTF2A1P52655 AC009948.4-201ENST00000604692 675 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.05□□□□□ -1.76
GTF2A1P52655 AL773545.4-201ENST00000637262 310 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 AL513478.4-201ENST00000641636 310 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
GTF2A1P52655 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.05□□□□□ -1.76
GTF2A1P52655 IPO8P1-201ENST00000455509 3109 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
GTF2A1P52655 AC007496.3-201ENST00000624987 3443 ntBASIC4.05□□□□□ -1.76
GTF2A1P52655 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GTF2A1P52655 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GTF2A1P52655 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.04□□□□□ -1.76
GTF2A1P52655 AL353746.1-201ENST00000566293 6881 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
GTF2A1P52655 AL133383.2-201ENST00000622958 2336 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 ZFRP1-201ENST00000457579 2970 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 SRP72P2-201ENST00000344851 1979 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 RN7SKP95-201ENST00000362860 303 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 RNU1-106P-201ENST00000384382 164 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 MIR621-201ENST00000384919 96 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GTF2A1P52655 OR1F12-201ENST00000402365 945 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.04□□□□□ -1.76
GTF2A1P52655 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
GTF2A1P52655 AC092832.1-201ENST00000422934 400 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 AC097523.2-201ENST00000435551 652 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 CNOT7P2-201ENST00000441051 832 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 VN1R25P-201ENST00000443385 738 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 AC112498.1-201ENST00000444401 332 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.04□□□□□ -1.76
GTF2A1P52655 CASP3P1-201ENST00000446037 609 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 AC108463.1-201ENST00000450258 347 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.04□□□□□ -1.76
GTF2A1P52655 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.04□□□□□ -1.76
GTF2A1P52655 AURKAPS2-201ENST00000454983 333 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 VN1R40P-201ENST00000455196 941 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 DNAJC19P1-201ENST00000455312 319 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 COPS8P2-201ENST00000473228 627 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 HIGD1AP14-201ENST00000507617 282 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 AC090568.1-201ENST00000509499 856 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 NDUFB9P3-201ENST00000521269 501 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
GTF2A1P52655 AL139174.1-201ENST00000531489 886 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.04□□□□□ -1.76
GTF2A1P52655 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.04□□□□□ -1.76
GTF2A1P52655 AC006116.3-201ENST00000592968 361 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 VN1R84P-201ENST00000593697 235 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.04□□□□□ -1.76
GTF2A1P52655 MIR6861-201ENST00000618657 64 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
GTF2A1P52655 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GTF2A1P52655 AF127577.6-201ENST00000623352 2191 ntBASIC4.04□□□□□ -1.76
GTF2A1P52655 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GTF2A1P52655 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
GTF2A1P52655 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.04□□□□□ -1.76
GTF2A1P52655 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
GTF2A1P52655 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.04□□□□□ -1.76
GTF2A1P52655 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GTF2A1P52655 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GTF2A1P52655 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GTF2A1P52655 CEP170P1-201ENST00000502249 4587 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GTF2A1P52655 SNORD66.1-201ENST00000391230 76 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 SSR1P1-201ENST00000407630 814 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.03□□□□□ -1.76
GTF2A1P52655 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GTF2A1P52655 AC006539.3-201ENST00000454258 129 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 ISCUP1-201ENST00000454451 448 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 RPS5P7-201ENST00000456664 608 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 RPL6P9-201ENST00000466502 859 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 AC096741.1-201ENST00000472250 846 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GTF2A1P52655 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GTF2A1P52655 RN7SKP66-201ENST00000516681 231 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 RN7SKP147-201ENST00000517154 244 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 IGKV1-32-201ENST00000519290 311 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.03□□□□□ -1.76
GTF2A1P52655 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
GTF2A1P52655 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GTF2A1P52655 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.03□□□□□ -1.76
GTF2A1P52655 AC027176.2-201ENST00000559166 746 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 MIR3691-201ENST00000578066 90 ntBASIC4.03□□□□□ -1.76
GTF2A1P52655 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms