Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5□□□□□ -1.61
CLCN3P51790 AL355852.1-201ENST00000454081 1771 ntBASIC5□□□□□ -1.61
CLCN3P51790 API5-210ENST00000534600 1760 ntTSL 5 BASIC5□□□□□ -1.61
CLCN3P51790 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLCN3P51790 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5□□□□□ -1.61
CLCN3P51790 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5□□□□□ -1.61
CLCN3P51790 AL672167.1-205ENST00000641112 3080 ntBASIC5□□□□□ -1.61
CLCN3P51790 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CLCN3P51790 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCN3P51790 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCN3P51790 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CLCN3P51790 AL672167.1-204ENST00000641875 3017 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 AC125257.1-201ENST00000560400 2930 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 RNU1-130P-201ENST00000363930 160 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 RNU6-481P-201ENST00000384194 107 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 SDHCP2-201ENST00000398565 501 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 UBE2V1P9-201ENST00000414760 368 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 MTCO3P4-201ENST00000419236 787 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AC092017.2-201ENST00000427600 362 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCN3P51790 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCN3P51790 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AL645931.1-201ENST00000439737 410 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 RPL23AP43-201ENST00000446445 471 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCN3P51790 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCN3P51790 RPL10P17-201ENST00000453852 316 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 RPS4XP12-201ENST00000461747 709 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AC109327.1-201ENST00000471666 403 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 AC020890.1-201ENST00000491837 504 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCN3P51790 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCN3P51790 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.99□□□□□ -1.61
CLCN3P51790 AC087894.1-201ENST00000538359 518 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 PARP1P2-201ENST00000556806 195 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 MIR4472-2-201ENST00000582069 67 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCN3P51790 AC027449.1-201ENST00000608890 407 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AC006338.2-201ENST00000616864 791 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 AC109809.1-201ENST00000619665 545 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 AC008993.2-201ENST00000631744 806 ntBASIC4.99□□□□□ -1.61
CLCN3P51790 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN3P51790 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLCN3P51790 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CLCN3P51790 AC093775.1-201ENST00000624154 1868 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AL731532.2-201ENST00000623542 1953 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCN3P51790 CPHL1P-201ENST00000461341 3407 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 AC093311.1-201ENST00000506586 2021 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 RNU6-1005P-201ENST00000384519 107 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AL592291.1-201ENST00000403830 352 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC023128.2-201ENST00000420880 1223 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 MTCO2P17-201ENST00000424336 677 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC115285.1-201ENST00000424879 736 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 RPL21P43-201ENST00000425440 472 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 RSL24D1P6-201ENST00000426934 401 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCN3P51790 AC093422.3-201ENST00000428506 305 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCN3P51790 NMNAT1P2-201ENST00000435192 860 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 GSTA7P-201ENST00000438425 448 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 NPM1P33-201ENST00000438918 872 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCN3P51790 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.98□□□□□ -1.61
CLCN3P51790 GTF3AP5-201ENST00000442645 697 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 MRPL48P1-201ENST00000445390 636 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCN3P51790 HMGB3P16-201ENST00000508037 287 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN3P51790 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCN3P51790 RNA5SP303-201ENST00000516192 130 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AC018442.3-201ENST00000523025 183 ntBASIC4.98□□□□□ -1.61
CLCN3P51790 AP003717.3-201ENST00000544832 1180 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms