Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 ASNSP1-204ENST00000641977 1664 ntBASIC4.63□□□□□ -1.67
SOX2P48431 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.63□□□□□ -1.67
SOX2P48431 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 AC119744.1-201ENST00000454746 1715 ntBASIC4.63□□□□□ -1.67
SOX2P48431 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.62□□□□□ -1.67
SOX2P48431 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 AC097461.1-201ENST00000568928 2821 ntBASIC4.62□□□□□ -1.67
SOX2P48431 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SOX2P48431 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 AL391994.1-201ENST00000254724 282 ntBASIC4.62□□□□□ -1.67
SOX2P48431 RNU6-623P-201ENST00000363143 105 ntBASIC4.62□□□□□ -1.67
SOX2P48431 RNU4-24P-201ENST00000364565 139 ntBASIC4.62□□□□□ -1.67
SOX2P48431 RNU4-2-201ENST00000365668 141 ntBASIC4.62□□□□□ -1.67
SOX2P48431 RNU6-1300P-201ENST00000391046 108 ntBASIC4.62□□□□□ -1.67
SOX2P48431 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 RPS3AP26-201ENST00000398259 784 ntBASIC4.62□□□□□ -1.67
SOX2P48431 HSPA8P15-201ENST00000401676 786 ntBASIC4.62□□□□□ -1.67
SOX2P48431 HSFY4P-201ENST00000415994 1181 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AL022400.1-201ENST00000423946 935 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.62□□□□□ -1.67
SOX2P48431 AC096638.2-201ENST00000434965 711 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 CYCSP24-201ENST00000445119 316 ntBASIC4.62□□□□□ -1.67
SOX2P48431 EEF1B2P6-201ENST00000445713 673 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AL672138.1-201ENST00000450604 1015 ntBASIC4.62□□□□□ -1.67
SOX2P48431 TPMTP4-201ENST00000450749 678 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AL035090.1-201ENST00000454835 332 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AP002884.1-201ENST00000479691 655 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AL117692.1-201ENST00000494283 713 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 RNA5SP135-201ENST00000517019 125 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 AC024909.2-201ENST00000553035 286 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.62□□□□□ -1.67
SOX2P48431 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.62□□□□□ -1.67
SOX2P48431 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 AL607023.1-201ENST00000620045 248 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AC007494.3-201ENST00000624660 743 ntBASIC4.62□□□□□ -1.67
SOX2P48431 CDRT1-208ENST00000630868 794 ntBASIC4.62□□□□□ -1.67
SOX2P48431 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX2P48431 SAMMSON-209ENST00000641222 1100 ntBASIC4.62□□□□□ -1.67
SOX2P48431 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SOX2P48431 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 HSPA8P17-201ENST00000427029 1382 ntBASIC4.62□□□□□ -1.67
SOX2P48431 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SOX2P48431 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.62□□□□□ -1.67
SOX2P48431 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SOX2P48431 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX2P48431 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SOX2P48431 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 OR52B3P-201ENST00000314715 928 ntBASIC4.61□□□□□ -1.67
SOX2P48431 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 Y_RNA.51-201ENST00000362725 102 ntBASIC4.61□□□□□ -1.67
SOX2P48431 Y_RNA.311-201ENST00000365068 96 ntBASIC4.61□□□□□ -1.67
SOX2P48431 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.61□□□□□ -1.67
SOX2P48431 SRSF1P1-201ENST00000424058 520 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AC007559.1-201ENST00000428736 355 ntBASIC4.61□□□□□ -1.67
SOX2P48431 MTND1P20-201ENST00000430341 950 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AL050321.1-201ENST00000432363 400 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 GAPDHP58-201ENST00000438477 1006 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.61□□□□□ -1.67
SOX2P48431 AC019185.1-201ENST00000442718 389 ntBASIC4.61□□□□□ -1.67
SOX2P48431 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 AC022431.1-201ENST00000450941 438 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX2P48431 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms