Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CXCL12P48061 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CXCL12P48061 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL12P48061 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.15□□□□□ -1.74
CXCL12P48061 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL12P48061 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL12P48061 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL12P48061 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.15□□□□□ -1.74
CXCL12P48061 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL12P48061 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL12P48061 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.15□□□□□ -1.74
CXCL12P48061 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CXCL12P48061 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.15□□□□□ -1.75
CXCL12P48061 SNORA60-201ENST00000362396 134 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL12P48061 AC233289.1-201ENST00000403700 508 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 MIR1179-201ENST00000408703 91 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 RN7SKP156-201ENST00000410308 342 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 MIR1911-201ENST00000410783 80 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.15□□□□□ -1.75
CXCL12P48061 OR6C71P-201ENST00000432580 913 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.15□□□□□ -1.75
CXCL12P48061 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.15□□□□□ -1.75
CXCL12P48061 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.15□□□□□ -1.75
CXCL12P48061 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.15□□□□□ -1.75
CXCL12P48061 AP000889.1-201ENST00000530968 660 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 CCNG2P1-201ENST00000549521 1000 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.15□□□□□ -1.75
CXCL12P48061 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.15□□□□□ -1.75
CXCL12P48061 AC022960.2-201ENST00000616300 666 ntBASIC4.15□□□□□ -1.75
CXCL12P48061 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.15□□□□□ -1.75
CXCL12P48061 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL12P48061 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL12P48061 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CXCL12P48061 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
CXCL12P48061 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL12P48061 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL12P48061 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL12P48061 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CXCL12P48061 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL12P48061 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
CXCL12P48061 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL12P48061 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL12P48061 OR4A15-201ENST00000314706 1035 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL12P48061 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL12P48061 KRR1P1-201ENST00000419430 803 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AC091390.3-201ENST00000426478 338 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL12P48061 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL12P48061 AC092447.2-201ENST00000435487 669 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL12P48061 AC006011.1-201ENST00000442758 349 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.14□□□□□ -1.75
CXCL12P48061 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.14□□□□□ -1.75
CXCL12P48061 PDSS1P2-201ENST00000449397 678 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AC104164.2-201ENST00000496953 495 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AC006499.5-201ENST00000505037 514 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.14□□□□□ -1.75
CXCL12P48061 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL12P48061 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.14□□□□□ -1.75
CXCL12P48061 CYCSP30-201ENST00000546447 172 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL12P48061 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.14□□□□□ -1.75
CXCL12P48061 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.14□□□□□ -1.75
CXCL12P48061 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.14□□□□□ -1.75
CXCL12P48061 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.14□□□□□ -1.75
CXCL12P48061 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL12P48061 AC087468.1-201ENST00000604365 630 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AC010201.1-201ENST00000605051 540 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 AP001005.3-201ENST00000622049 129 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL12P48061 AC009093.8-201ENST00000641769 292 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CXCL12P48061 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL12P48061 AC097461.1-201ENST00000568928 2821 ntBASIC4.14□□□□□ -1.75
CXCL12P48061 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXCL12P48061 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.14□□□□□ -1.75
CXCL12P48061 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CXCL12P48061 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL12P48061 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.13□□□□□ -1.75
CXCL12P48061 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL12P48061 SNORA9-201ENST00000384215 133 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 RNU1-44P-201ENST00000384453 163 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 MIR30B-201ENST00000384850 88 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 SNORD66.1-201ENST00000391230 76 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 AL078604.1-201ENST00000404609 466 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 RN7SKP247-201ENST00000411094 308 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 AL450263.2-201ENST00000439400 589 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 RPS4XP4-201ENST00000443195 763 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL12P48061 AL591363.1-201ENST00000450091 483 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL12P48061 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXCL12P48061 AC026403.1-201ENST00000518938 295 ntBASIC4.13□□□□□ -1.75
CXCL12P48061 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.13□□□□□ -1.75
CXCL12P48061 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.13□□□□□ -1.75
CXCL12P48061 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.13□□□□□ -1.75
CXCL12P48061 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.13□□□□□ -1.75
CXCL12P48061 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms