Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.57□□□□□ -1.68
BRCC3P46736 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.57□□□□□ -1.68
BRCC3P46736 AC006116.5-201ENST00000591936 559 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 SNX6P1-201ENST00000601728 1224 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 AC024941.1-201ENST00000612250 334 ntBASIC4.57□□□□□ -1.68
BRCC3P46736 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRCC3P46736 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRCC3P46736 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.57□□□□□ -1.68
BRCC3P46736 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.57□□□□□ -1.68
BRCC3P46736 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRCC3P46736 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRCC3P46736 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
BRCC3P46736 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRCC3P46736 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
BRCC3P46736 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRCC3P46736 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.57□□□□□ -1.68
BRCC3P46736 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCC3P46736 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCC3P46736 AC007342.7-201ENST00000624610 2337 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRCC3P46736 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.56□□□□□ -1.68
BRCC3P46736 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRCC3P46736 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRCC3P46736 RNU1-20P-201ENST00000363314 162 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 SNORA37-201ENST00000384504 129 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 SNORD66.1-201ENST00000391230 76 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 RN7SKP182-201ENST00000410772 298 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.56□□□□□ -1.68
BRCC3P46736 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 AL445528.1-201ENST00000426330 420 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 AL132765.1-201ENST00000434165 553 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.56□□□□□ -1.68
BRCC3P46736 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
BRCC3P46736 RNA5SP73-201ENST00000516744 108 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 MIR2116-201ENST00000517221 80 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.56□□□□□ -1.68
BRCC3P46736 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.56□□□□□ -1.68
BRCC3P46736 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.56□□□□□ -1.68
BRCC3P46736 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.56□□□□□ -1.68
BRCC3P46736 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.56□□□□□ -1.68
BRCC3P46736 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.56□□□□□ -1.68
BRCC3P46736 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.56□□□□□ -1.68
BRCC3P46736 RPL7P50-201ENST00000600588 727 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 AL109618.2-201ENST00000605527 211 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 AC073111.2-201ENST00000605657 1075 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 AC015802.5-201ENST00000607478 399 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 AL135786.2-201ENST00000608422 615 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 MIR6867-201ENST00000610636 67 ntBASIC4.56□□□□□ -1.68
BRCC3P46736 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.56□□□□□ -1.68
BRCC3P46736 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRCC3P46736 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
BRCC3P46736 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
BRCC3P46736 AC005332.5-201ENST00000591222 2919 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRCC3P46736 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
BRCC3P46736 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
BRCC3P46736 RNA5SP130-201ENST00000364431 114 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
BRCC3P46736 AL034403.1-201ENST00000399414 885 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRCC3P46736 AL078604.1-201ENST00000404609 466 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 EIF4A1P3-201ENST00000411521 244 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 OR8G2P-201ENST00000412796 908 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 AL590806.1-201ENST00000415818 853 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 AL356095.1-201ENST00000417217 199 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.55□□□□□ -1.68
BRCC3P46736 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.55□□□□□ -1.68
BRCC3P46736 PPIAP13-201ENST00000434706 478 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.55□□□□□ -1.68
BRCC3P46736 PTMAP3-201ENST00000447474 330 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 RPS27AP15-201ENST00000447672 466 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 CALM1P2-201ENST00000452941 448 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 AC069277.2-201ENST00000454211 432 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 RPL23AP81-201ENST00000455252 467 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 AL592156.1-201ENST00000508758 304 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.55□□□□□ -1.68
BRCC3P46736 AC099522.1-202ENST00000514718 367 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.55□□□□□ -1.68
BRCC3P46736 AL731537.2-201ENST00000561565 951 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 BNIP3P5-201ENST00000562290 498 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 AC233280.2-201ENST00000603917 1070 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 HPVC1-201ENST00000629899 1198 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.55□□□□□ -1.68
BRCC3P46736 AL163152.1-201ENST00000642001 374 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRCC3P46736 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRCC3P46736 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.55□□□□□ -1.68
BRCC3P46736 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
BRCC3P46736 SCN1A-220ENST00000641603 12506 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 AC139713.2-215ENST00000641428 5037 ntBASIC4.55□□□□□ -1.68
BRCC3P46736 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms